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QUIDDICH: QUick IDentification of DIagnostic CHaracters
- Abstract With the advent of molecular genetic methods, an increasing number of morphologically cryptic taxa has been discovered. The majority of them, however, remains formally undescribed and without a proper name although their importance in ecology and evolution is increasingly being acknowledged. Despite suggestions to complement traditional descriptions with genetic characters, the taxonomic community appears to be reluctant to adopt this proposition. As an incentive, we introduce QUIDDICH, a tool for the QUick IDentification of DIgnostic CHaracters, which automatically scans a DNA or amino acid alignment for those columns that allow to distinguish taxa and classifies them into four different types of diagnostic characters. QUIDDICH is a system‐independent, fast and user‐friendly tool that requires few manual steps and provides a comprehensive output, which can be included in formal taxonomic descriptions. Thus, cryptic taxa do not have to remain in taxonomic crypsis and, bearing a proper name, can readily be included in biodiversity assessments and ecological and evolutionary analyses. QUIDDICH can be obtained from the comprehensive R archive network (CRAN, https://cran.r-project.org/package=quiddich).
Author: | A. Luise Kühn, Martin Haase |
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URN: | urn:nbn:de:gbv:9-opus-40484 |
DOI: | https://doi.org/10.1111/jzs.12347 |
ISSN: | 1439-0469 |
Parent Title (English): | Journal of Zoological Systematics and Evolutionary Research |
Publisher: | Wiley |
Place of publication: | Hoboken, New Jersey |
Document Type: | Article |
Language: | English |
Date of first Publication: | 2020/01/28 |
Release Date: | 2020/12/02 |
Tag: | Characteristic Attribute Organization System; DNA taxonomy; SPecies IDentity and Evolution in R; diagnostic (genetic) characters; integrative taxonomy |
GND Keyword: | - |
Volume: | 58 |
Issue: | 1 |
First Page: | 22 |
Last Page: | 26 |
Faculties: | Mathematisch-Naturwissenschaftliche Fakultät / Institut für Mathematik und Informatik |
Licence (German): | Creative Commons - Namensnennung-Nicht kommerziell-Keine Bearbeitung |