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Unveiling the role of novel carbohydrate‐binding modules in laminarin interaction of multimodular proteins from marine Bacteroidota during phytoplankton blooms

  • Laminarin, a β(1,3)‐glucan, serves as a storage polysaccharide in marine microalgae such as diatoms. Its abundance, water solubility and simple structure make it an appealing substrate for marine bacteria. Consequently, many marine bacteria have evolved strategies to scavenge and decompose laminarin, employing carbohydrate‐binding modules (CBMs) as crucial components. In this study, we characterized two previously unassigned domains as laminarin‐binding CBMs in multimodular proteins from the marine bacterium Christiangramia forsetii KT0803T, thereby introducing the new laminarin‐binding CBM families CBM102 and CBM103. We identified four CBM102s in a surface glycan‐binding protein (SGBP) and a single CBM103 linked to a glycoside hydrolase module from family 16 (GH16_3). Our analysis revealed that both modular proteins have an elongated shape, with GH16_3 exhibiting greater flexibility than SGBP. This flexibility may aid in the recognition and/or degradation of laminarin, while the constraints in SGBP could facilitate the docking of laminarin onto the bacterial surface. Exploration of bacterial metagenome‐assembled genomes (MAGs) from phytoplankton blooms in the North Sea showed that both laminarin‐binding CBM families are widespread among marine Bacteroidota. The high protein abundance of CBM102‐ and CBM103‐containing proteins during phytoplankton blooms further emphasizes their significance in marine laminarin utilization.

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Author: Marie‐Katherin ZühlkeORCiD, Elizabeth Ficko‐BleanORCiD, Daniel BartosikORCiD, Nicolas TerraponORCiD, Alexandra JeudyORCiD, Murielle JamORCiD, Fengqing WangORCiD, Norma Welsch, Alexandra DürwaldORCiD, Laura Torres Martin, Robert Larocque, Diane JouanneauORCiD, Tom EisenackORCiD, François ThomasORCiD, Anke Trautwein‐SchultORCiD, Hanno TeelingORCiD, Dörte BecherORCiD, Thomas SchwederORCiD, Mirjam CzjzekORCiD
URN:urn:nbn:de:gbv:9-opus-117658
DOI:https://doi.org/10.1111/1462-2920.16624
ISSN:1462-2920
Parent Title (English):Environmental Microbiology
Publisher:Wiley
Place of publication:Hoboken, NJ
Document Type:Article
Language:English
Date of first Publication:2024/05/16
Release Date:2024/11/11
Volume:26
Issue:5
Article Number:e16624
Page Number:18
Faculties:Mathematisch-Naturwissenschaftliche Fakultät / Institut für Pharmazie
Collections:weitere DFG-förderfähige Artikel
Licence (German):License LogoCreative Commons - Namensnennung 4.0 International