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Abstract: Johann Friedrich Wilhelm Jerusalem's Betrachtungen über die vornehmsten Wahrheiten der Religion was a bestseller of the German Enlightenment, although it is a theological book. In this article, his Betrachtungen is treated as a text that tries to synthesize the newly established philosophy of history with more or less traditional theological patterns. Jerusalem uses the argument of universal development and progress in history to demonstrate the evidence of divine providence. His book thus resembles Gotthold Ephraim Lessing's Erziehung des Menschengeschlechts, which it may have influenced. The main purpose of Jerusalem is to calm and pacify the individual's soul. He wants to prove that the individual's life fits into the general order of history, which is also the purpose of ‘profane’ philosophy of history in German Enlightenment. Jerusalem's neological philosophy of history provides new answers to the problem of evil after the decline of a metaphysical theodicy in the tradition of Leibniz.
The properties of the ion feature of the Thomson scattering signal are investigated. Firstly, the description of the atomic form factor by hydrogen-like wave functions is reviewed and better screening charges are obtained. Then the ionic structure in systems with several ion species is calculated from the HNC integral equation.
Interaction of injected dust particles with metastable neon atoms in a radio frequency plasma
(2008)
Spatial density and temperature profiles of neon metastables produced in a radio frequency (rf) discharge were investigated by means of tunable diode laser absorption spectroscopy. The experiments were performed in the PULVA1 reactor, which is designed for the study of complex (dusty) plasmas. The line averaged measured density is about 1.5×1015 m−3 in the bulk and drops almost linearly in the plasma sheath. The gas temperature is in the range of 370–390 K. The flow of metastable atoms in the plasma sheath deduced from the spatial density distribution is dominated by the flow towards the rf electrode. The sheath length is supposed as the effective diffusion length in the plasma sheath region. This approximation was used to investigate the interaction of injected particles with the plasma. The observations and estimation provide evidence for a significant interaction between metastable atoms and powder particles which is important for energy transfer from the plasma to the particles. The power per unit area absorbed by dust particles due to the collision of metastable atoms with the dust particle surface is in the range of a few tens of mW m−2.
The study of sow reproduction traits is important in livestock science and production to increase animal survival and economic efficiency. This work deals with the detection of different effects on within-litter variance of birth weight by applying different statistical models with different distributional assumptions. The piglets within one litter were separated by sex. The trait of sow was formed from the sample variances of birth weights within litter separated by sex to consider the sex effect on mean birth weight. A linear mixed model (LMM) approach was fitted to the logarithmized sample variance and the sample standard deviation. A generalized linear mixed model with gamma distributed residuals and log-link function was applied to the untransformed sample variance. Appropriate weights were constructed to account for individual litter sizes. Models were compared by analysing data from Landrace and Large White. The estimates of heritability for the different traits ranged from 6-14%. The LMM for the weighted standard deviation of birth weights was identified as most suitable in terms of residual normality. Furthermore, the impact of piglets´ sex on birth weight variability was tested, but it was only proved for one practical dataset. Additionally, we analysed the influence of including or not including birth weights of stillborn piglets on the estimates of variance components of birth weight variability. With omitted stillborns the estimates of heritability resulted in about 2% higher values than in investigations of total born piglets. We were interested in the presence of the random boar effect on birth weight variability. The corresponding variance component was tested via restricted likelihood ratio test. Among others, the null distribution of the test statistic was approximated by parametric bootstrap simulations which were computational intensive. We picked up a two-parametric approach from literature and proposed a three-parametric approach to approximate the null distribution of the test statistic. We have analysed correlated data in balanced (simulated data) and unbalanced (empirical data) designs. The two-parametric approach using a scaled mixture of chisquare-distributions as well as a three-parametric approach, that uses a mixture of the point mass at zero and a gamma distribution, behaved most solid in all investigations and were most powerful in the simulation study.
The WEGA stellarator is used to confine low temperature, overdense (densities exceeding the cut-off density of the heating wave) plasmas by magnetic fields in the range of B=50-500 mT. Microwave heating systems are used to ignite gas discharges using hydrogen, helium, neon or argon as working gases. The produced plasmas have been analyzed using Langmuir and emissive probes, a single-channel interferometer and ultra-high resolution Doppler spectroscopy. For a typical argon discharge in the low field operation, B=56 mT, the maximum electron density is n_e~10^18m^{-3} with temperatures in the range of T=4-12 eV. The plasma parameters are determined by using Langmuir probes and are cross-checked with interferometry. It is demonstrated within this work that the joint use of emissive probes and ultra-high resolution Doppler spectroscopy allows a precise measurement of the radial electric field. Here the floating potential measurements using emissive probes have been compared to measurements of the poloidal rotation of the plasma which is also linked to the radial electric field. In order to alter the plasma parameters a biasing probe setup has been used during this work. The focus of this work is on demonstrating the ability to modify the existing radial electric field in a plasma by using the biasing probe. This technique is in principle not new, as it has been around for decades. Looking at details, it turns out that describing low field operation WEGA argon plasmas in connection with biasing is not covered by the present set of theoretical approaches and experimental cognition. This work will commence with a basic approach and first establishes the diagnostic tools in a well-known discharge. Then the perturbation caused by the biasing probe is assessed. Following the characterization of the unperturbed plasmas, plasma states altered by the operation of the energized biasing probe will be characterized. It is demonstrated that modifying the existing radial electric field can be achieved and reliably diagnosed using spectroscopy and probe measurements. In order to verify the different approaches for determining the radial electric field the diagnostics are cross-checked against another whenever possible. During biasing the plasma two different stable plasma states have been found. Stable here refers to the state existing much longer than the confinement time for WEGA. The presence of a calorimetric limiter placed in the scrape-off layer has an impact on the type of the plasma state. The two observed plasma states differ in plasma parameter profiles, such as density, temperature, electric field and confined energy. The results are compared to two simple models. One model relies on the relevant atomic processes and a second one is based on neoclassical theory. Both models can be used to derive the particle and power flux from the plasma. The losses predicted by the atomic models can be tested using bolometry. It can be shown that both models agree well in the description of the particle balance of the electrons for large regions of the plasma. By comparing the models the neoclassical heat flux turns out to be small compared to the energy fluxes caused by atomic processes. For the reference discharge taking the energy flux due to the atomic processes and balancing it by the input microwave power is satisfying the energy balance, without the need for transport. For the biased discharges it turns out that neoclassical transport can be neglected as well, but the additional biasing power has to be taken into account. A simple model for the biasing power is motivated and tested. An agreement in the energy balance can be reached in this way as far as the models are applicable. The models also allow drawing conclusions on the amount of absorbed microwave power.
Understanding of the regulatory mechanisms controlling stress gene expression of S.aureus in response to environmental stress is very essential in studying its fitness and virulence. In this work, the changes in protein expression profiles as well as the gene transcription of S.aureus after heat exposure, osmotic stress and in response to the antibiotic puromycin were studied in order to provide detailed insights into the response of S.aureus to various kinds of environmental stress under in vitro conditions, namely: (1) to investigate the global response of S.aureus to heat stress conditions using transcriptomic and proteomic analyses. (2) to study the transcriptome and proteome of S.aureus in response to antibiotic substance puromycin. (3) to define the proteome signatures of S.aureus under NaCl stress condition. (4) to complete the proteome map of cytoplasmic proteins of S.aureus by identifying proteins exclusively synthesized during the exposure to stress. Firstly, the high resolution 2-D protein gel electrophoresis technique combined with MALDI-TOF-MS and a DNA array approach were used to investigate the cellular response of S.aureus to heat stress. A switch from normal growth temperature to high temperature condition revealed complex changes in the protein expression pattern as well as the genes expression profile. The effect of puromycin stress on S.aureus cells was analyzed, using a gel-based proteomic approach and transcriptomic analyses with DNA microarrays. We compared the protein synthesis pattern as well as the transcription data of S.aureus in response to puromycin stress with that in response to heat shock. The results demonstrated that both stress conditions induced specific, overlapping and general responses. Finally, the protein expression profile of S.aureus in response to NaCl stress was analyzed with 2D gel based proteomic approach. Our proteome analyses revealed the repression of the synthesis of many enzymes belong to different metabolism pathways . In summary, the signatures for stress or starvation stimuli can be used as diagnostic tools for the prediction of the mode of action of new antibiotics or for studying the physiological state of cells grown. Expression of the respective genes under in vivo conditions could provide some ideas on the environmental signals that specifically influence the survival of S.aureus within and outside the host.
Mind the gap: Information gaps and bridging options in assessing in-situ conservation achievements
(2008)
The biodiversity crisis has gained political attention on a global level. The “2010 Target” of the Convention on Biological Diversity (CBD) aims to significantly reduce the loss of biodiversity by 2010. In order to achieve this, a network of representative and effectively managed protected areas is to be established. The effectiveness of protected areas thus represents one indicator for progress towards the CBD’s 2010 Target. However, indicators require information. The present study, in a first step, reviews the availability of open access long-term ecological data for assessing protected area effectiveness. This review shows two parallel – though contradictory – phenomena: data overkill and data scarcity. While the number of online databases providing open access data on biodiversity has grown tremendously, no long-term ecological data for a larger set of protected areas can be openly accessed. Reasons for this data scarcity are discussed. Based on this lack of information, in a second step, a method to bridge information gaps through social science research is aspired. An innovative Conservation Success Framework is developed, which defines and relates conservation needs, conservation capacity and conservation actions, its three main components. The basic assumption is that conservation can only be successful where the conservation capacity exists that is required to implement the conservation actions determined by the conservation needs. The framework was used to develop open and closed questionnaires for application in two Mexican biosphere reserves, the Sierra Gorda and the Sierra de Manantlán. As "conservation success" is often immeasurable in protected areas in practice due to unspecific conservation objectives the term is for the case studies substituted by “conservation achievements”, i.e. clearly noticeable effects from conservation actions. Overall, almost 60 interviews were conducted with different stakeholder groups. The gained information is validated through social science research techniques, such as triangulation of perspectives and active and passive observation. Based on this, conservation needs are identified and conservation capacities summarised and discussed for both case study sites. Implemented conservation actions addressing identified conservation needs and conservation capacity constraints are then analysed. In addition, noticeable effects from conservation actions on the state of biodiversity at case study sites, i.e. the conservation achievements, are described. Where locally available, non-open access data (as opposing open access data) are used to verify the findings from the social science research. Identified conservation achievements at both case study sites are evident both from quantitative information (for example forest cover increase according to non-open access data) and qualitative information (for example perceived change in the occurrence of illegal activities according to interviews). In addition, rather “intangible” indicators that can only be revealed through qualitative surveys are identified for both sites. This study thus highlights the crucial importance of integrating different types of data, ecological and socio-economic, as well as quantitative and qualitative ones. The present study concludes with a series of recommendations 1) to local practitioners at the two case study sites, and 2) to the international conservation community. Local practitioners may benefit from the present study because its results provide for each site a) an overview of existing conservation needs and implemented conservation actions; b) an easy way to identify action gaps; c) a baseline to identify progress indicators; and d) an overview of diverse perspectives on the current effectiveness of the biosphere reserves. These benefits are considered of particular importance as they can be influential in the revision of the site’s management plans, which both are now approximately ten years old and will soon be revised. The international conservation community will not be able to make a clear statement in the year 2010 about the effectiveness of protected areas on a global level due to a lack of information and transparency. However, the year 2010 should not be considered an end point for measuring progress in in-situ conservation; instead protected area quality standards must be created, effectiveness evaluations institutionalised and efforts to foster regular reporting must continue. Consequently, a scheme of consolidated actions from local to national and international level is proposed that could help to sustainably bridge existing information gaps and close them on the long run. In the end, progress reporting on the effectiveness of protected areas, and other indicators, can only improve if different governance levels “mind the information gaps” in cooperation, until continued information gathering and sharing hopefully closes these gaps one day.
In this work we will analyse the capabilities of several numerical techniques for the description of different physical systems. Thereby, the considered systems range from quantum over semiclassical to classical and from few- to many-particle systems. For each case we address an interesting, partly unsolved question. Despite the different topics we address in the individual chapters, the problems under study are somehow related because we focus on the time evolution of the system. In chapter 1 we investigate the behaviour of a single quantum particle in the presence of an external disordered background (static potentials). Starting from the quantum percolation problem, we address the fundamental question of a disorder induced (Anderson-) transition from extended to localised single-particle eigenstates. Distinguishing isolating from conducting states by applying a local distribution approach for the local density of states (LDOS), we detect the quantum percolation threshold in two- and three-dimensions. Extending the quantum percolation model to a quantum random resistor model, we comment on the possible relevance of our results to the influence of disorder on the conductivity in graphene sheets. Furthermore, we confirm the localisation properties of the 2D percolation model by calculating the full quantum time evolution of a given initial state. For the calculation of the LDOS as well as for the Chebyshev expansion of the time evolution operator, the kernel polynomial method (KPM) is the key numerical technique. In chapter 2 we examine how a single quantum particle is influenced by retarded bosonic fields that are inherent to the system. Within the Holstein model, these bosonic degrees of freedom (phonons) give rise to an infinite dimensional Hilbert space, posing a true many-particle problem. Constituting a minimal model for polaron formation, the Holstein model allows us to study the optical absorption and activated transport in polaronic systems. Using a two-dimensional variant of the KPM, we calculate for the first time quasi-exactly the optical absorption and dc-conductivity as a function of temperature. Concerning the numerical technique, the close relation to the time evolution in the other chapters get clear if we identify temperature with an imaginary time. In chapter 3 we come back to the time evolution of a quantum particle in an external, static potential and investigate the capability of semiclassical approximations to it. Considering various one-dimensional geometries, we address basic quantum effects as tunneling, interference and anharmonicity. The question is, to which extend and at which numerical costs, several semiclassical methods can reproduce the exact result for the quantum dynamics, calculated by Chebyshev expansion. To this end we consider the linearised semiclassical propagator method, the Wigner-Moyal approach and the recently proposed quantum tomography. A conceptually very interesting aspect of the compared semiclassical methods is their relation to different representations of quantum mechanics (wave function/density matrix, Wigner function, quantum tomogram). Finally, in chapter 4 we calculate the dynamics of a classical many-particle system under the influence of external fields. Considering a low-temperature rf-plasma, we investigate the interplay of the plasma dynamics and the motion of dust particles, immersed into the plasma for diagnostic reasons. In addition to the huge number of involved particles, the numerical description of this systems faces the challenge of a large range of involved time and length scales. Exploiting the mass differences of plasma constituents and dust particles allows for separating the PIC description of the plasma from the MD simulation of the dust particles in the effective surrounding plasma.
The term atomic cluster relates to compounds of at least two or three atoms. Thereby the physical properties are size dependent and the property transitions between single atoms and bulk material are not always smooth. Ion traps allow it to observe internal cluster properties independent from the influence of external forces. In this work the electron induced decay of singly negatively charged atomic clusters was observed. The dissociation cross section of the clusters is dominated by detachment of the only weakly bound outer electrons. For simple atoms at low electron energies a simple scaling law can be obtained that includes only the binding energies of the valence electrons. Nevertheless for larger sizes theoretical calculations predict so called "giant resonances" as dominant decay process in metal clusters. Due to mass limitations in storage rings exist so far only cross section measurements for simple anions and small negative molecules. In this work the electron detachment cross sections of small negatively charged carbon (Cn- n=2-12), aluminium (Aln- n=2-7) and silver clusters (Agn- n=1-11) were measured in an electrostatic ion beam trap. The classical scaling law, including only the binding energies of the valence electrons, turned out to be not sufficient, especially for larger clusters. In order to improve the correlation between measured and predicted values it was proposed to involve the influence of the cluster volume and the specific polarisability induced by long range coulomb interaction. For silver clusters the best agreement was obtained using a combination of the projected area reduced by the polarisability. The existence of "giant resonances" could not be confirmed. According to theory for clusters with a broad internal energy distribution, a power-law decay close to 1/time is expected. For some clusters the lifetime behaviour would be strongly quenched by photon emission. The thermionic evaporative decay of anionic aluminium and silver clusters in a size range from one to ten constituents was tested but a correlation could be only found incidentally for a few cluster sizes.
The human antibody response to experimental colonization with Staphylococcus aureus NCTC8325-4
(2008)
The four main work packages and their most important results are briefly described as following. 1. Characterization of the extracellular proteome of S. aureus NCTC8325-4 Reference maps of the extracellular proteins of S. aureus NCTC8325-4 were produced at pH ranges 6-11 and 4-7. In total, 119 (pH 6-11) and 177 (pH 4-7) protein spots were identified, corresponding to 48 and 114 proteins, respectively. Among them were many well-known virulence factors such as alpha-hemolysin (Hla), beta-hemolysin Hlb, gamma-hemolysin subunits (HlgA-C), hyaluronate lyase (HysA) and staphylococcal superantigen-like protein 11 (Ssl11). We also detected various extracellular enzymes, which can cause tissue degradation and are involved in nutrient acquisition, for example, autolysin (Atl), glycerol ester hydrolase (Geh), lipase (Lip), thermonuclease (Nuc), several serine proteases SplA-F (SplA-F), V8 protease (SspA), cysteine protease (SspB), staphopain thiol proteinase (88195808, SspP). Many of these proteins probably also contribute to the virulence of S. aureus. 2. Optimization of a 2-D immunoblot (IB) method for the comprehensive investigation of IgG binding to S. aureus extracellular proteins (strain NCTC8325-4) The immune proteome of S. aureus NCTC8325-4 was revealed by probing 2-D blots of S. aureus extracellular proteins at the two pH ranges 6-11 and 4-7 with a pool of sera from 16 volunteers. IgG binding was detected with high sensitivity using a peroxidase-coupled secondary Ab in combination with an ECL-substrate. With application of the software package Delta2D, we could clearly define 66 immune reactive spots on the immunoblots (IBs) of pH range 6-11 and 38 spots on IBs of pH range 4-7. 72 of these 104 immune reactive spots could be identified by matching the IBs with the protein reference maps. These spots represented 36 identified proteins, many of which are known virulence factors, or they are involved in bacterial cell wall biosynthesis and degradation. Generally, the most abundant proteins were also highly immune reactive, but there was no strict correlation between protein abundance and immune reactivity. Some low abundance proteins, especially basic proteins, showed high immune reactivity on 2-D IBs, for example, Atl, 88195808 (SspP) and iron-regulated surface determinant protein A (IsdA). On the other hand, we observed proteins, which were present in large amounts but did not bind IgG such as peptidoglycan hydrolase (LytM) and a hypothetical protein 88193909 (SAOUHSC_00094). 3. Determination of the anti-staphylococcal Ab profiles of S. aureus carriers and noncarriers Comparing the serum IgG binding patterns of sera from the 16 individual volunteers, we observed pronounced heterogeneity in total IgG binding, spot patterns and spot intensities. Five spots were stronger in carriers than in noncarriers (P< 0.05, Mann-Whitney U test). These spots represent IgG binding to SspA, SspB, IsaA, and two hypothetical proteins. A principal component analysis based on differential IgG binding to these spots showed that the carriers were more closely related to each other than the noncarriers, but that they could not be clearly separated from the noncarriers. 4. Does experimental colonization induce changes of the anti-staphylococcal Ab profiles? Finally, we tested whether symptom-free experimental colonization of the 16 volunteers with S. aureus NCTC8325-4 elicited an IgG response. When we compared sera obtained before colonization with those taken 4 weeks after the inoculation with the laboratory S. aureus strain, we did not observe major changes in the Ab patterns. We conclude that short- term colonization with a strain of low virulence does not suffice to induce an Ab production, which is comparable to that present already before the colonization. Thus, either long term high density colonization is required, or as we consider most likely, the adaptive immune response is primarily triggered by (minor) S. aureus infections. Taken together, in this work we have separated the soluble proteins from complex extracellular S. aureus protein extracts with good reproducibility, large coverage (pH 6-11 and 4-7) and high resolution. With application of an ECL substrate, our 2-D immunoblotting procedure resulted in the highly sensitive detection of IgG binding over a wide range of signal intensities. The most important finding with this technique was the pronounced variability of anti-staphylococcal Ab profiles in healthy adults. This could well explain differences in susceptibility to S. aureus infection and its complications. The Ab responses are presumably triggered by long-term colonization or, more likely, by minor infections with S. aureus, since experimental nasal colonization of healthy volunteers with a bacterial strain of low virulence did not induce impressive changes in the Ab profiles.