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In this thesis, it was the subject to build a setup to study the interaction of clusters with intense laser light. A magnetron sputter cluster ion source was built to create metal clusters for the planned investigations. Furthermore, a linear Paul trap setup was built in order to allow the investigation of the mentioned interaction at one specific cluster size. The whole apparatus was characterized and first experiments were performed.
For surgery in congenital hyperinsulinism (CHI), a distinct surgical strategy and technique is required for focal, diffuse and atypical CHI. In focal CHI, a confined, localized and parenchyma-sparing resection which is guided by the PET-CT is always indicated in order to cure the patient. In diffuse CHI, however, the results of surgical therapy are unpredictable and cure is an exception. Therefore, a strong tendency exists nowadays that medical therapy should be preferred in diffuse CHI. In atypical CHI the situation is more complex: if the focal lesion or the segmental mosaic are not too extensive, cure by resection should be possible. But care must be taken in atypical cases not to resect too much of the gland in order not to induce diabetes.
Novel heterocyclic alpha-phosphinoamino acids, by structural relationship named 3-phosphaprolines, were obtained by cyclocondensation of 2-phenylphosphinoethylamines with glyoxylic, pyruvic or phenylglyoxylic acid at room temperature in diethylether. The reactions proceed via primary attack of the P-lone electron pair, as shown by the synthesis of phosphonium glycolates from tertiary phosphines and glyoxylic acid, and addition of PH at the carbonyl group. The ring closure proceeds by replacement of the hydroxy by the amino group and is kinetically controlled. NMR monitoring of the phosphaprolines in CD3OD over several days indicates changes of the diastereoisomer ratios leading to higher contents of the more stable trans-diastereoisomers. The zwitterionic compounds are soluble in part in CD3OD, DMF or DMSO, are somewhat sensitive to air in solution and may undergo hydrolysis with larger amounts of water. The structures are proved by multinuclear NMR spectra and two crystal structure analyses. Suitable phosphaprolines as well phosphonium glycolates and Ni(COD)2 allow to generate precatalysts, activated by NaH for the oligomerisation of ethylene to mainly linear products with methyl and vinyl end groups. Some additional investigations with phosphinophenolates, another type of P-C-C-O- ligands, were performed for comparison. Precatalysts prepared from 2-phosphinophenolesters and Ni(COD)2 at room temperature were characterized by multinuclear NMR but decomposed on heating to stable nickel cis-bis(P,O-chelate) complexes. Heating precatalysts generated from a phosphinophenolester or phosphinophenols and Ni(COD)2 in the presence of ethylene under pressure led to linear ethylene oligomers. These reactions are much faster than the above mentioned conversions with NaH activated P,O-Ni-catalysts. In the presence of 9-decenol with unprotected remote hydroxyl group incorporation of a small amount of isolated hydroxyoctyl side groups takes place, detected by 13C NMR spectroscopy. Finally it is stated that the development of a facile synthesis and the characterization of the properties of the phosphaprolines pave the way for derivatisation and further studies with these novel types of amino acids.
Interactive Visualization for the Exploration of Aligned Biological Networks and Their Evolution
(2011)
Network Visualization is a widely used tool in biology. The biological networks, as protein-interaction-networks are important for many aspects in life. Today biologists use the comparison of networks of different species (network alignment) to understand the networks in more detail and to understand the underlying evolution. The goal of this work is to develop a visualization software that is able to visualize network alignments and also their evolution. The presented software is the first software for such visualization tasks. It uses 3D graphics and also animations for the dynamic visualization of evolution. This work consists of a review of the Related Work, a chapter about our Graph-based Approach for Interactive Visualization of Evolving Network Alignments, an explanation of the Graph Layout Algorithm and some hints for the Software System.
Transition metal complexes play a crucial role in antitumor therapy. Complexes of platinum, ruthenium as well as lanthanum and gallium have been investigated in preclinical as well as in clinical studies. The best known platinum(II) agents approved worldwide, cisplatin or carboplatin, are used in nearly 50% of all cancer therapies. This work focused on the development of new metal-based drugs that could act against human cancer cells. It was motivated in part by previous work with Cu(II) complexes, reporting new coordination compounds of SOD mimicking and cytotoxic activities. On the basis of this work we chose several commercially available heterocyclic ligands to synthesize new metal ion complexes in search of their interesting biological activity. New as well as previously reported Cu(II), Co(II), Pt(II) and Zn(II) complexes were synthesized using various ligands (1-6). Almost all chelating 2:1 ligand-metal complexes were obtained generally in water at room temperature in the reaction of metal(II) chloride with corresponding aromatic nitrogen ligands bearing an O-carboxylate group ligand. The synthesized chelating complexes were characterized by the use of spectroscopic methods, elemental analyses and HPLC chromatography and some by X-ray crystallography. Such coordination compounds are easily formed by transition metals with free orbitals d that can accept the donor electron pairs. The coordination is through the heterocyclic nitrogen and carboxylate oxygen donor atoms, which was shown by analysis of the characteristic functional groups in the IR spectra. The d-d transitions and absorption of visible light in Cu(II) and Co(II) complexes make them highly colored, blue, green or green-blue, respectively. The configuration of the coordination center was established in some cases by X-ray crystallography. Most of the already published structures possess the trans configuration. This led to the assumption that other uncrystallized complexes were also trans configured. However, X-ray data of the Cu(II) complex of 5 showed quite unexpectedly the cis configuration. On the other hand, the LC/MS experiments with the Pt(II) complex of 5 indicated that this complex exists in two isomeric forms, i.e., cis and trans at the Pt(II) center. Through the use of density functional calculations we optimized the structures and calculated the energies and dipole moments. The differences in energy for all complexes were about 6 to 15-fold lower when compared to cis and transplatin. The DFT calculations confirmed that the trans-isomers are more stable than their cis-isomers. UV-Vis stability studies with most of the synthesized complexes as well as some other Cu(II) complexes were performed to study the spectral changes over 24 h in addition of glutathione, a tripeptide present in the cancer cells and ascorbate that were added to the incubations. The results indicated time-dependent changes and instability of the complexes in the cells and their possible decomposition to lose the ligand and release the metal ion. In the case of Cu(II) complexes, reduction of Cu(II) to Cu(I) may take place. New species such as GSSG could arise and the complexes may decarboxylate, but these structures were not elucidated. The synthesized coordination metal(II) complexes were tested for their potential antiproliferative activities by using the crystal violet staining method in a panel of human cancer cell lines. Out of all complexes, three Pt(II) complexes of 2, 5 and 6 showed satisfactory activity and for these complexes the IC50 values were additionally determined in new RT-4, DAN-G and MCF-7 cancer cell lines. Interestingly, the active complexes were the chelating trans complexes which is quite unexpected, based on the difference in activities between cis and transplatin. All of the complexes were tested for their potential antimicrobial activities in comparison to the standard antibiotics on such bacterial strains as Staphylococcus aureus, Bacillus subtilis, Escherichia coli, Pseudomonas aeruginosa and yeast Candida maltosa. Co(II) complexes have been especially known to act against bacterial strains. The activity of the Co(II) complexes was indeed the highest of all metal(II) complexes. The ligand 2 (a nicotinic acid isomer) was also found active. This fact could explain why some antibacterial activity was found in the MIC assay. In addition to the complexes synthesized in this work, several novel heterocyclic metal(II) complexes of copper, ruthenium, platinum, gallium, osmium and lanthanum from other research groups were screened for their antiproliferative activity, some of which exhibited very potent activity in the cancer cell lines. In conclusion, Pt(II) complexes with bis-chelating heterocyclic carboxylate ligands represent a particularly interesting new class of compounds from the view point of their structural and biological properties.
Background: Therapyrelated mucositis is associated with considerable morbidity. This complication following allogeneic stem cell therapy (alloSCT) is less severe after reduced intense conditioning (RIC); however, even here it may be serious. Methods: 52 patients (male: n = 35 (67%), female: n = 17 (33%)) at a median age of 62 years (35–73 years) underwent alloSCT after RIC. Conditioning was either total body irradiation (TBI)<sub>2Gy</sub>/±fludarabine (n = 33, 63.5%) or chemotherapy based. Graftversushost disease (GvHD) prophylaxis was carried out with cyclosporine A ± mycophenolate mofetil (MMF). 45 patients (87%) received shortcourse methotrexate (MTX). Mucositis was graded according to the Bearman and the World Health Organisation (WHO) scale. A variety of parameters were correlated with mucositis. Results: The Bearman and WHO scales showed excellent correlation. Mucositis was significantly more severe after chemotherapybased conditioning compared to conditioning with TBI<sub>2Gy</sub>/±fludarabine (p < 0.002) as well as in cases with an increase in creatinine levels above the upper normal value (UNV) on day +1 after SCT (p < 0.05). Furthermore, the severity correlated with time to engraftment of leucocytes (correlation coefficient (cc) = 0.26, p < 0.02) and thrombocytes (cc = 0.38, p < 0.001). Conclusions: The conditioning regimen and increased creatinine levels at day +1 were identified as factors predicting the severity of mucositis after RICSCT. Creatinine levels on day +1 after SCT may help identify patients at risk for severe mucositis in the further course of transplantation.
In this thesis, a stereoscopic camera system is presented that is designed for the use on parabolic flights for the investigation of dusty plasmas under microgravity conditions. This camera system consists of three synchronously triggered high-speed cameras observing a common volume of approximately (15 × 15 × 15) mm³ size. In this volume, the three-dimensional trajectories of a large number of particles surrounded by a dense dust cloud were reconstructed. For this task an intricate set of reconstruction algorithms has been developed, including a four-frame linking algorithm and a complex combined 2D/3D tracking algorithm for a reliable tracking of 3D particles. Furthermore, these algorithms effectively suppress so-called ghost particles in the evaluation process which are reconstructed from falsely identified 2D particle correspondences. Dusty plasmas under microgravity conditions are of special interest due to their complex structure and the variety of observable dynamic phenomena. Under typical discharge conditions, a central dust-free void is formed, surrounded by a dense particle cloud. Since the void is inherently dust-free, particles shot into the void can be uniquely identified and used to probe plasma properties inside this region. In the dust cloud itself, processes like self-excited dust-density waves can be observed under suitable experimental conditions. Using the presented camera setup and reconstruction algorithms, two parts of a dusty plasma under microgravity on parabolic flights are investigated. Initially, the force field creating and sustaining the central void is deduced and characterized. The combination of ion drag and electric field force is measured and compared to current models of the ion drag, showing a good agreement with these models. While previous investigations on the forces were limited to two-dimensional slices through the void, our measurements represent the first three-dimensional quantitative analysis of a large fraction of the void region. From this analysis the structure of the force field is determined and separated into a radial and a non-radial (or orthogonal) contribution. It is shown that the radial contribution dominates in the central void, while non-radial forces increase in magnitude close to the void edge. The radial domination is also observed in the velocity distribution of the probe particles which is significantly shifted to radially outward directed velocities for particles leaving the void. Assuming a strictly radial force profile in the horizontal mid-plane of the void, the friction coefficient determining the interaction of the probe particles with the neutral gas background is experimentally determined and shown to match the theoretical expectation. Subsequently, particles at the outer surface of the dust cloud are reconstructed. There, the particles are found to oscillate due to dust-density waves propagating through the high-density dust cloud. For the investigation of the correlation between waves and oscillating particles, the instantaneous wave and oscillation properties are determined and the instantaneous phase difference is obtained. Modeling the probe particles as driven, damped harmonic oscillators, these phase differences between waves and particles are interpreted with respect to the resonance frequency of the oscillating particles. Spatial variations of the phase difference are observed that may be attributed to different frequencies of the dust-density waves, or to changes of the resonance frequency induced by changing local plasma parameters. From a few measurements of particles oscillating at their resonance frequency, information about the surrounding plasma or properties of the particles themselves can be deduced. However, a larger number of reconstructed trajectories is necessary in order to interpret the phase differences on a reliable data basis. The presented camera setup in combination with the evaluation algorithms is a flexible system for the investigation of three-dimensional dusty plasmas. Its robust construction allows the operation of the system in challenging environments such as on parabolic flights, where spatial limitations and vibrations produced by the aircraft make special demands on such a diagnostic tool. This versatility makes our stereoscopic camera setup and the reconstruction process a suitable standard diagnostic for the application with dusty plasmas; this system will therefore be used in future research amongst other things for the investigation of boundary layers in extended three-dimensional dust clouds under microgravity.
Three-dimensional (3D) dynamical properties of fast particles being injected into the void region of a dusty plasma under microgravity conditions have been measured. For that purpose, a stereoscopic camera setup of three cameras has been developed that is able to track and reconstruct the 3D trajectories of individual dust particles. From more than 500 particle trajectories, the force field inside the void region and its influence on particle movement are derived and analyzed in 3D. It is shown that the force field is dominated by forces pointing radially out of the void and that this radial character is reflected in the velocity distributions of particles leaving the void. Furthermore, the structure of the force field is used for measuring the neutral gas friction for the particles inside the void.
Background/Aims: Acute pancreatitis (AP) is characterized by premature zymogen activation, systemic inflammatory response resulting in inflammatory infiltrates, sustained intracellular calcium, neurogenic inflammation and pain. The inhibitory neurotransmitter and cytoprotective amino acid glycine exerts a direct inhibitory effect on inflammatory cells, inhibits calcium influx and neuronal activation and therefore represents a putative therapeutic agent in AP. Methods: To explore the impact of glycine, mild AP was induced in rats by supramaximal cerulein stimulation (10 µg/kg BW/h) and severe AP by retrograde injection of sodium taurocholate solution (3%) into the common biliopancreatic duct. 100/300 mmol glycine was administered intravenously before induction of AP. To elucidate the effect of glycine on AP, we determined pathomorphology, pancreatic cytokines as well as proteases, serum lipase and amylase, pancreatic and lung MPO activity and pain sensation. Results: Glycine administration resulted in a noticeable improvement of pathomorphological alterations in AP, such as a reduction of necrosis, inflammatory infiltrates and cytoplasmic vacuoles in cerulein pancreatitis. In taurocholate pancreatitis, glycine additionally diminished pancreatic cytokines and MPO activity, as well as serum lipase and amylase levels. Conclusions: Glycine reduced the severity of mild and much more of severe AP by attenuating the intrapancreatic and systemic inflammatory response. Therefore, glycine seems to be a promising tool for prophylactic treatment of AP.
Histopathologic and Clinical Subtypes of Autoimmune Pancreatitis: The Honolulu Consensus Document
(2011)
Autoimmune pancreatitis (AIP) has been extensively reported from Japan, Europe and the USA. While the descriptions of AIP from Japan have predominantly been based on the presence of a distinct clinical phenotype, reports from Europe and the USA describe at least 2 histopathologic patterns in patients diagnosed with AIP, namely lymphoplasmacytic sclerosing pancreatitis (LPSP) and idiopathic duct-centric pancreatitis (IDCP) or granulocytic epithelial lesion- positive pancreatitis. While the 2 entities share common histopathologic features (periductal lymphoplasmacytic infiltration and peculiar periductal fibrosis), expert pathologists can accurately distinguish them on the basis of other unique histopathologic features. Clinically, the 2 entities have a similar presentation (obstructive jaundice/pancreatic mass and a dramatic response to steroids), but they differ significantly in their demography, serology, involvement of other organs and disease relapse rate. While LPSP is associated with elevation of titers of nonspecific autoantibodies and serum IgG4 levels, IDCP does not have definitive serologic autoimmune markers. All experts agreed that the clinical phenotypes associated with LPSP and IDCP should be nosologically distinguished; however, their terminology was controversial. While most experts agreed that the entities should be referred to as type 1 and type 2 AIP, respectively, others had concerns regarding use of the term ‘autoimmune’ to describe IDCP.