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Periodontitis is one of the most prevalent oral diseases worldwide caused by multifactorial interactions between host and oral bacteria. Altered cellular metabolism of host and microbes releases a number of intermediary end-products known as metabolites. Recently, there is an increasing interest in identifying metabolites from oral fluids like saliva to widen the understanding of the complex pathogenesis of periodontitis. It is believed, that some metabolites might serve as indicators toward early detection and screening of periodontitis and perhaps even for monitoring its prognosis in the future. Because contemporary periodontal screening methods are deficient, there is an urgent need for novel approaches in periodontal screening procedures. To this end we associated oral parameters (clinical attachment level, periodontal probing depth, supragingival plaque, supragingival calculus, number of missing teeth, and removable denture) with a large set of salivary metabolites (n=383) obtained by mass spectrometry among a subsample (n=909) of non-diabetic participants of the Study of Health in Pomerania (SHIP-Trend-0). Linear regression analyses were performed in age-stratified groups and adjusted for potential confounders. A multifaceted image of associated metabolites (n=107) with considerable differences according to age groups was revealed. In the young (20-39 years) and middle-aged groups (40-59 years), we found metabolites predominantly associated with periodontal variables; whereas among the older subjects (60 + years), tooth loss was strongly associated with metabolite levels. Metabolites associated with periodontal variables were clearly linked to tissue destruction, host- defence mechanisms and bacterial metabolism. Across all age groups, the bacterial metabolite phenylacetate was significantly associated with periodontal variables. Our results revealed alterations of the salivary metabolome in association with age and oral health status. Among our comprehensive panel of metabolites, periodontitis was significantly associated with the bacterial metabolite phenylacetate, a promising substance for further biomarker research.
The thyroid gland is of crucial importance in human metabolism. Its main secretion products, L-thyroxine (T4) and 3,3’,5-triiodo-L-thyronine (T3), are essential for proper development of multiple tissues and organs as well as for their functioning in the adult organism. The secretion of thyroid hormones (TH) is stimulated by thyrotropin (TSH) released from the pituitary gland. This tight connection between both hormones is of crucial importance for the clinical diagnosis of thyroid dysfunction. During the last two decades the concept of TH action developed to increased complexity. However, most of the recent advances in the field of TH research are based either on cell culture, tissue or animal models or stem from studies investigating specific hypotheses in humans. Thus, experimental approaches for the comprehensive, hypothesis-free characterization of metabolic effects of classical and non-classical TH in human are urgently needed. This holds true in particular for the TH derivative 3,5-diiodothyronine (3,5-T2). It was described to alleviate the typical detrimental metabolic consequences of a high-fat diet and even reversed hepatic steatosis. To replicate these experimental findings from rodents in humans, comprehensive data from the population-based Study of Health in Pomerania (SHIP) was analyzed in the present work. Based on a euthyroid, diabetes-free SHIP-subsample (N=761), non-linear associations between the serum concentrations of 3,5-T2 and glucose as well as TSH were detected. In contrast, no significant 3,5-T2 associations with several anthropometric markers or blood lipid parameters were observed, partially questioning the transferability of the beneficial metabolic 3,5-T2 effects reported for pharmacological intervention studies on rodents to humans. Recent advances in technological development now allow for the use of high-throughput spectrometric platforms to characterize the small molecule content (metabolome) of blood and urine samples. The detected metabolome constituents can be associated with any relevant parameters of interest, thereby extending the scope of classical association studies. Therefore, in the second part of the present thesis, the metabolic fingerprints of FT4, TSH as well as the ratio log(TSH)/FT4 as markers of thyroid function were profiled. Strong differences between the metabolic fingerprints of FT4 and TSH were observed, partially alleviated by the log(TSH)/FT4 ratio. These findings not only emphasize the high diagnostic value of the combined evaluation of TSH and FT4 in the assessment of thyroid function but additionally argue for a holistic approach in the diagnosis of thyroid function. More moderate endogenous effects of 3,5-T2 were evaluated by comparing its urinary metabolic fingerprint with that of the classical TH. A number of associations became apparent, indicating a function of endogenous 3,5-T2 in intermediary metabolism. Besides partially confirming associations with respect to the presented findings in animal studies, the strongest 3,5-T2-association was observed with trigonelline, a metabolite described earlier to exhibit similar beneficial effects as 3,5-T2 on glucose metabolism when used as a pharmacological agent in animal studies. An association towards hippurate indicated a partial overlap with the metabolic profile of TSH and hence consolidated results from the first two projects in the sense of a thyromimetic role of 3,5-T2 in the feedback regulation of TH. The diagnosis of thyroid disorders based on the classical markers TSH and FT4 suffers from restricted sensitivity in the subclinical range as both parameters have broad reference ranges in the general population. Therefore, in an approach to detect novel peripheral biomarkers of thyroid function, sixteen healthy young men were challenged with 250 µg of levothyroxine (L-T4) over a period of eight weeks in the fourth project presented here as part of this thesis. Monitoring of the volunteers over a period of sixteen weeks allowed delineation of the metabolic shifts first towards thyrotoxicosis and later in the context of the restoration of euthyroidism. The use of mass spectrometry for the comprehensive characterization of the metabolite as well as the protein content of samples taken at the different time points revealed profound molecular alterations, despite the lack of any clinical symptoms in the volunteers. Molecular signatures of thyrotoxicosis indicated increased energy expenditure, pronounced defense against systemic oxidative stress, a general drop in apolipoproteins, as well as increased abundances of proteins related to the coagulation cascade and the complement system. Good and robust classification of the thyroid state independent of TSH and FT4 was achieved using random forest analysis with a subset of fifteen metabolites and proteins, indicating new options in the individualized diagnosis of thyroid disorders.
Comprehensive study of the discharge mode transition in inductively coupled radio frequency plasmas
(2016)
In this contribution, the mode transition of an inductively coupled radio frequency plasma at low pressure is investigated. Therefore, a comprehensive set of plasma diagnostics were applied to determine plasma and processing parameters. Therewith, the plasma kinetics and especially the important elementary processes were studied. Hence, the reason for the mode transition was identified.
Amine transaminases (ATAs) are pyridoxal-5′-phosphate (PLP)-dependent enzymes that catalyze the transfer of an amino group from an amino donor to an aldehyde and/or ketone. In the past decade, the enzymatic reductive amination of prochiral ketones catalyzed by ATAs has attracted the attention of researchers, and more traditional chemical routes were replaced by enzymatic ones in industrial manufacturing. In the present work, the influence of the presence of an α,β-unsaturated system in a methylketone model substrate was investigated, using a set of five wild-type ATAs, the (R)-selective from Aspergillus terreus (Atr-TA) and Mycobacterium vanbaalenii (Mva-TA), the (S)-selective from Chromobacterium violaceum (Cvi-TA), Ruegeria pomeroyi (Rpo-TA), V. fluvialis (Vfl-TA) and an engineered variant of V. fluvialis (ATA-256 from Codexis). The high conversion rate (80 to 99%) and optical purity (78 to 99% ee) of both (R)- and (S)-ATAs for the substrate 1-phenyl-3-butanone, using isopropylamine (IPA) as an amino donor, were observed. However, the double bond in the α,β-position of 4-phenylbut-3-en-2-one dramatically reduced wild-type ATA reactivity, leading to conversions of <10% (without affecting the enantioselectivity). In contrast, the commercially engineered V. fluvialis variant, ATA-256, still enabled an 87% conversion, yielding a corresponding amine with >99% ee. Computational docking simulations showed the differences in orientation and intermolecular interactions in the active sites, providing insights to rationalize the observed experimental results.
Simple Summary
Monitoring animal behavior provides an indicator of their health and welfare. For this purpose, video surveillance is an important method to get an unbiased insight into behavior, as animals often show different behavior in the presence of humans. However, manual analysis of video data is costly and time-consuming. For this reason, we present a method for automated analysis using computer vision—a method for teaching the computer to see like a human. In this study, we use computer vision to detect red foxes and their body posture (lying, sitting, or standing). With this data we are able to monitor the animals, determine their activity, and identify their behavior.
Abstract
The behavior of animals is related to their health and welfare status. The latter plays a particular role in animal experiments, where continuous monitoring is essential for animal welfare. In this study, we focus on red foxes in an experimental setting and study their behavior. Although animal behavior is a complex concept, it can be described as a combination of body posture and activity. To measure body posture and activity, video monitoring can be used as a non-invasive and cost-efficient tool. While it is possible to analyze the video data resulting from the experiment manually, this method is time consuming and costly. We therefore use computer vision to detect and track the animals over several days. The detector is based on a neural network architecture. It is trained to detect red foxes and their body postures, i.e., ‘lying’, ‘sitting’, and ‘standing’. The trained algorithm has a mean average precision of 99.91%. The combination of activity and posture results in nearly continuous monitoring of animal behavior. Furthermore, the detector is suitable for real-time evaluation. In conclusion, evaluating the behavior of foxes in an experimental setting using computer vision is a powerful tool for cost-efficient real-time monitoring.
Abstract
We present experiments on the luminescence of excitons confined in a potential trap at milli-Kelvin bath temperatures under continuous-wave (cw) excitation. They reveal several distinct features like a kink in the dependence of the total integrated luminescence intensity on excitation laser power and a bimodal distribution of the spatially resolved luminescence. Furthermore, we discuss the present state of the theoretical description of Bose–Einstein condensation of excitons with respect to signatures of a condensate in the luminescence. The comparison of the experimental data with theoretical results with respect to the spatially resolved as well as the integrated luminescence intensity shows the necessity of taking into account a Bose–Einstein condensed excitonic phase in order to understand the behaviour of the trapped excitons.
Reactive species generated by medical gas plasma technology can be enriched in liquids for use in oncology targeting disseminated malignancies, such as metastatic colorectal cancer. Notwithstanding, reactive species quantities depend on the treatment mode, and we recently showed gas plasma exposure in conductive modes to be superior for cancer tissue treatment. However, evidence is lacking that such a conductive mode also equips gas plasma-treated liquids to confer augmented intraperitoneal anticancer activity. To this end, employing atmospheric pressure argon plasma jet kINPen-treated Ringer’s lactate (oxRilac) in a CT26-model of colorectal peritoneal carcinomatosis, we tested repeated intraabdominal injection of such remotely or conductively oxidized liquid for antitumor control and immunomodulation. Enhanced reactive species formation in conductive mode correlated with reduced tumor burden in vivo, emphasizing the advantage of conduction over the free mode for plasma-conditioned liquids. Interestingly, the infiltration of lymphocytes into the tumors was equally enhanced by both treatments. However, significantly lower levels of interleukin (IL)4 and IL13 and increased levels of IL2 argue for a shift in intratumoral T-helper cell subpopulations correlating with disease control. In conclusion, our data argue for using conductively over remotely prepared plasma-treated liquids for anticancer treatment.
Abstract
Nanoscale multilayer thin films of W and PC (Polycarbonate) show, due to the great difference of the components’ characteristics, fascinating properties for a variety of possible applications and provide an interesting research field, but are hard to fabricate with low layer thicknesses. Because of the great acoustic mismatch between the two materials, such nanoscale structures are promising candidates for new phononic materials, where phonon propagation is strongly reduced. In this article we show for the first time that W/PC-multilayers can indeed be grown with high quality by pulsed laser deposition. We analyzed the polymer properties depending on the laser fluence used for deposition, which enabled us to find best experimental conditions for the fabrication of high-acoustic-mismatch W/PC multilayers. The multilayers were analyzed by fs pump-probe spectroscopy showing that phonon dynamics on the ps time-scale can strongly be tailored by structural design. While already periodic multilayers exhibit strong phonon localization, especially aperiodic structures present outstandingly low phonon propagation properties making such 1D-layered W/PC nano-structures interesting for new phononic applications.
Formaldehyde is a toxic metabolite that is formed in large quantities during bacterial utilization of the methoxy sugar 6-O-methyl-d-galactose, an abundant monosaccharide in the red algal polysaccharide porphyran. Marine bacteria capable of metabolizing porphyran must therefore possess suitable detoxification systems for formaldehyde. We demonstrate here that detoxification of formaldehyde in the marine Flavobacterium Zobellia galactanivorans proceeds via the ribulose monophosphate pathway. Simultaneously, we show that the genes encoding the key enzymes of this pathway are important for maintaining high formaldehyde resistance. Additionally, these genes are upregulated in the presence of porphyran, allowing us to connect porphyran degradation to the detoxification of formed formaldehyde.
Connectivity-Based Predictions of Hand Motor Outcome for Patients at the Subacute Stage After Stroke
(2016)
Background: Connectivity-based predictions of hand motor outcome have been proposed to be useful in stroke patients. We intended to assess the prognostic value of different imaging methods on short-term (3 months) and long-term (6 months) motor outcome after stroke.
Methods: We measured resting state functional connectivity (rsFC), diffusion weighted imaging (DWI) and grip strength in 19 stroke patients within the first days (5–9 days) after stroke. Outcome measurements for short-term (3 months) and long-term (6 months) motor function was assessed by the Motricity Index (MI) of the upper limb and the box and block test (BB). Patients were predominantly mildly affected since signed consent was necessary at inclusion. We performed a multiple stepwise regression analysis to compare the predictive value of rsFC, DWI and clinical measurements.
Results: Patients showed relevant improvement in both motor outcome tests. As expected grip strength at inclusion was a predictor for short- and long-term motor outcome as assessed by MI. Diffusion-based tract volume (DTV) of the tracts between ipsilesional primary motor cortex and contralesional anterior cerebellar hemisphere showed a strong trend (p = 0.05) for a predictive power for long-term motor outcome as measured by MI. DTV of the interhemispheric tracts between both primary motor cortices was predictive for both short- and long-term motor outcome in BB. rsFC was not associated with motor outcome.
Conclusions: Grip strength is a good predictor of hand motor outcome concerning strength-related measurements (MI) for mildly affected subacute patients. Therefore additional connectivity measurements seem to be redundant in this group. Using more complex movement recruiting bilateral motor areas as an outcome parameter, DTV and in particular interhemispheric pathways might enhance predictive value of hand motor outcome.
Wound antisepsis has undergone a renaissance due to the introduction of highly effective wound-compatible antimicrobial agents and the spread of multidrug-resistant organisms (MDROs). However, a strict indication must be set for the application of these agents. An infected or critically colonized wound must be treated antiseptically. In addition, systemic antibiotic therapy is required in case the infection spreads. If applied preventively, the Wounds-at-Risk Score allows an assessment of the risk for infection and thus appropriateness of the indication. The content of this updated consensus recommendation still largely consists of discussing properties of octenidine dihydrochloride (OCT), polihexanide, and iodophores. The evaluations of hypochlorite, taurolidine, and silver ions have been updated. For critically colonized and infected chronic wounds as well as for burns, polihexanide is classified as the active agent of choice. The combination 0.1% OCT/phenoxyethanol (PE) solution is suitable for acute, contaminated, and traumatic wounds, including MRSA-colonized wounds due to its deep action. For chronic wounds, preparations with 0.05% OCT are preferable. For bite, stab/puncture, and gunshot wounds, polyvinylpyrrolidone (PVP)-iodine is the first choice, while polihexanide and hypochlorite are superior to PVP-iodine for the treatment of contaminated acute and chronic wounds. For the decolonization of wounds colonized or infected with MDROs, the combination of OCT/PE is preferred. For peritoneal rinsing or rinsing of other cavities with a lack of drainage potential as well as the risk of central nervous system exposure, hypochlorite is the superior active agent. Silver-sulfadiazine is classified as dispensable, while dyes, organic mercury compounds, and hydrogen peroxide alone are classified as obsolete. As promising prospects, acetic acid, the combination of negative pressure wound therapy with the instillation of antiseptics (NPWTi), and cold atmospheric plasma are also subjects of this assessment.
Introduction: Outcome measures are key to tailor rehabilitation goals to the stroke patient's individual needs and to monitor poststroke recovery. The large number of available outcome measures leads to high variability in clinical use. Currently, an internationally agreed core set of motor outcome measures for clinical application is lacking. Therefore, the goal was to develop such a set to serve as a quality standard in clinical motor rehabilitation poststroke.
Methods: Outcome measures for the upper and lower extremities, and activities of daily living (ADL)/stroke-specific outcomes were identified and presented to stroke rehabilitation experts in an electronic Delphi study. In round 1, clinical feasibility and relevance of the outcome measures were rated on a 7-point Likert scale. In round 2, those rated at least as “relevant” and “feasible” were ranked within the body functions, activities, and participation domains of the International Classification of Functioning, Disability, and Health (ICF). Furthermore, measurement time points poststroke were indicated. In round 3, answers were reviewed in reference to overall results to reach final consensus.
Results: In total, 119 outcome measures were presented to 33 experts from 18 countries. The recommended core set includes the Fugl–Meyer Motor Assessment and Action Research Arm Test for the upper extremity section; the Fugl–Meyer Motor Assessment, 10-m Walk Test, Timed-Up-and-Go, and Berg Balance Scale for the lower extremity section; and the National Institutes of Health Stroke Scale, and Barthel Index or Functional Independence Measure for the ADL/stroke-specific section. The Stroke Impact Scale was recommended spanning all ICF domains. Recommended measurement time points are days 2 ± 1 and 7; weeks 2, 4, and 12; 6 months poststroke and every following 6th month.
Discussion and Conclusion: Agreement was found upon a set of nine outcome measures for application in clinical motor rehabilitation poststroke, with seven measurement time points following the stages of poststroke recovery. This core set was specifically developed for clinical practice and distinguishes itself from initiatives for stroke rehabilitation research. The next challenge is to implement this clinical core set across the full stroke care continuum with the aim to improve the transparency, comparability, and quality of stroke rehabilitation at a regional, national, and international level.
Introduction: Outcome measures are key to tailor rehabilitation goals to the stroke patient's individual needs and to monitor poststroke recovery. The large number of available outcome measures leads to high variability in clinical use. Currently, an internationally agreed core set of motor outcome measures for clinical application is lacking. Therefore, the goal was to develop such a set to serve as a quality standard in clinical motor rehabilitation poststroke.
Methods: Outcome measures for the upper and lower extremities, and activities of daily living (ADL)/stroke-specific outcomes were identified and presented to stroke rehabilitation experts in an electronic Delphi study. In round 1, clinical feasibility and relevance of the outcome measures were rated on a 7-point Likert scale. In round 2, those rated at least as “relevant” and “feasible” were ranked within the body functions, activities, and participation domains of the International Classification of Functioning, Disability, and Health (ICF). Furthermore, measurement time points poststroke were indicated. In round 3, answers were reviewed in reference to overall results to reach final consensus.
Results: In total, 119 outcome measures were presented to 33 experts from 18 countries. The recommended core set includes the Fugl–Meyer Motor Assessment and Action Research Arm Test for the upper extremity section; the Fugl–Meyer Motor Assessment, 10-m Walk Test, Timed-Up-and-Go, and Berg Balance Scale for the lower extremity section; and the National Institutes of Health Stroke Scale, and Barthel Index or Functional Independence Measure for the ADL/stroke-specific section. The Stroke Impact Scale was recommended spanning all ICF domains. Recommended measurement time points are days 2 ± 1 and 7; weeks 2, 4, and 12; 6 months poststroke and every following 6th month.
Discussion and Conclusion: Agreement was found upon a set of nine outcome measures for application in clinical motor rehabilitation poststroke, with seven measurement time points following the stages of poststroke recovery. This core set was specifically developed for clinical practice and distinguishes itself from initiatives for stroke rehabilitation research. The next challenge is to implement this clinical core set across the full stroke care continuum with the aim to improve the transparency, comparability, and quality of stroke rehabilitation at a regional, national, and international level.
Introduction: Outcome measures are key to tailor rehabilitation goals to the stroke patient's individual needs and to monitor poststroke recovery. The large number of available outcome measures leads to high variability in clinical use. Currently, an internationally agreed core set of motor outcome measures for clinical application is lacking. Therefore, the goal was to develop such a set to serve as a quality standard in clinical motor rehabilitation poststroke.
Methods: Outcome measures for the upper and lower extremities, and activities of daily living (ADL)/stroke-specific outcomes were identified and presented to stroke rehabilitation experts in an electronic Delphi study. In round 1, clinical feasibility and relevance of the outcome measures were rated on a 7-point Likert scale. In round 2, those rated at least as “relevant” and “feasible” were ranked within the body functions, activities, and participation domains of the International Classification of Functioning, Disability, and Health (ICF). Furthermore, measurement time points poststroke were indicated. In round 3, answers were reviewed in reference to overall results to reach final consensus.
Results: In total, 119 outcome measures were presented to 33 experts from 18 countries. The recommended core set includes the Fugl–Meyer Motor Assessment and Action Research Arm Test for the upper extremity section; the Fugl–Meyer Motor Assessment, 10-m Walk Test, Timed-Up-and-Go, and Berg Balance Scale for the lower extremity section; and the National Institutes of Health Stroke Scale, and Barthel Index or Functional Independence Measure for the ADL/stroke-specific section. The Stroke Impact Scale was recommended spanning all ICF domains. Recommended measurement time points are days 2 ± 1 and 7; weeks 2, 4, and 12; 6 months poststroke and every following 6th month.
Discussion and Conclusion: Agreement was found upon a set of nine outcome measures for application in clinical motor rehabilitation poststroke, with seven measurement time points following the stages of poststroke recovery. This core set was specifically developed for clinical practice and distinguishes itself from initiatives for stroke rehabilitation research. The next challenge is to implement this clinical core set across the full stroke care continuum with the aim to improve the transparency, comparability, and quality of stroke rehabilitation at a regional, national, and international level.
The aquaculture industry has been consistently and successfully growing over the
years, supplying over 50% of the fish humans consume. A large part of this success is due
to the implementation of vaccination, which is by far the most reliable prophylactic method
in large-scale fish farming. Nonetheless, although recent fish vaccines have greatly
contributed to the development and sustainability of the aquaculture industry, they not
always offer sufficient protection to provide acceptable survival rates when infectious
diseases outbreaks occur. Therefore, infectious diseases and effective vaccines still
constitute major problems for aquaculture.
Different practical aspects and biological factors of fish have also contributed to the
unsuccessful outcome of fish vaccines. To date, many of the most effective vaccines for fish
are injectable, and their formulation includes aluminum or oil emulsion adjuvants. Both facts
constitute a major issue for animal welfare due to the stress and side effects they trigger.
Great strides have been made in innovative technologies for fish vaccines. However, as of
today, they are not available on the market. Thus, improvements in vaccine formulations and
delivery routes remain an open topic and leads the to-do list of science with the aquaculture
of the future.
Vaccination provides immunity against a determined pathogen, and this is inherent
to the immune system. Therefore, thorough knowledge about the fish immune system and
how it is influenced by internal and external factors will certainly support rational vaccine
design. Thereby, the immune responses triggered by a vaccine can be exhaustively
characterized, and the formulations improved in case it is needed.
Hence, the goal of this PhD thesis, is to provide knowledge to improve fish
vaccination, both in its formulation and in its efficacy, aiming to promote the rational design
of fish vaccines. Additionally, this work proposes a holistic view of fish, where the
physiology and culture conditions of the fish are the starting points for the development and
application of vaccines. Thus, concepts and considerations for rational vaccine design
specific for fish are presented here.
Article I of this thesis offers a comprehensive review on the current situation in
Chile, but also worldwide aquaculture and the challenges it must face in the future. Namely,
recurrent pathogenic outbreaks and sub-optimal levels of protection due to inefficient
vaccination. This article established an open and flexible ground upon which to reflect on
how and what to improve in fish vaccines, leading the efforts towards rational vaccine
design.
In Article II, we investigated whether the current most used vaccination route,
intraperitoneal, can be improved by reducing the side effects of adjuvants, replacing them
with in the vaccine formulations with Poly-(D,L-lactic-co-glycolic) acid (PLGA)
microparticles, that serve simultaneously as vaccine vehicle and adjuvants.
Article III summarizes the scientific literature about what is known about the teleost
thymus. From this, it became clear how external factors such as photoperiod and seasonality
can modulate this primary lymphatic organ, and probably, immune responses. These are
essential factors to consider if effective and protective vaccines are needed in species highly
influenced by the environment such as fish.
As discussed in Article III, fish are poikilotherm animals, highly sensitive to
environmental factors like light. In Article IV, we reported for the first time, light generates
daily rhythms in cells’ circulation and gene expression, entraining the trout immune
response. Therefore, “when” (time of the day) we stimulate fish matters in order to get
optimal immune responses. Article V provides valuable knowledge about what happens
with fish immune responses, against a bacterial agent, under constant cues like light/dark
cycles and temperature. Once again, “when” we stimulate fish (season), influences the fish
immune status and therefore, their immune responses.
Finally, Article VI reports, for the first time, leukocytes extracted from fins of trout
directly respond to a parasitic infection. This article supports the idea that further research
must be done on fish mucosal surfaces, since they are key to stimulating/vaccinating fish, as
they are a natural entry route for pathogens and modulate the immune responses mounted.
Overall, the information provided by these articles is highly relevant for the
aquaculture industry. Firstly, because the vaccine platform based on PLGA microparticles
is promising for the future of fish vaccination, harmful adjuvants can be avoided, while still
providing enhanced stimulation thanks to the timed-released capacity of the particles.
Additionally, they offer the possibility to adapt them to in-feed vaccine pellets, which is the
ideal delivery route for fish. Secondly, accurate vaccination protocols can be established;
vaccination should be done during daytime, and preferably during the morning, where the
physiological status of fish provide optimal conditions for induction of an ultimately
protective immune response after vaccination. Furthermore, vaccination should be done
during warm months, spring, or summertime, as apparently fish have free-run internal clocks
that negatively modulate adaptive immune responses during wintertime.
In summary, the present thesis provides a novel concept for vaccination of
aquacultured species based on new data for rational vaccine design, with optimal application
procedures based on the optimal timing (season and daytime), reduced stress by oral
application and considerations about improving “first-line defenses” by vaccination via
mucosal surfaces of gut or skin.
CFTR encodes for a chloride and bicarbonate channel expressed at the apical membrane of polarized epithelial cells. Transepithelial sodium transport mediated by the amiloride-sensitive sodium channel ENaC is thought to contribute to the manifestation of CF disease. Thus, ENaC is a therapeutic target in CF and a valid cystic fibrosis modifier gene. We have characterized SCNN1B as a genetic modifier in the three independent patient cohorts of F508del-CFTR homozygotes. We could identify a regulatory element at SCNN1B to the genomic segment rs168748-rs2303153-rs4968000 by fine-mapping (Pbest = 0.0177), consistently observing the risk allele rs2303153-C and the contrasting benign allele rs2303153-G in all three patient cohorts. Furthermore, our results show that expression levels of SCNN1B are associated with rs2303153 genotype in intestinal epithelia (P = 0.003). Our data confirm that the well-established biological role of SCNN1B can be recognized by an association study on informative endophenotypes in the rare disease cystic fibrosis and calls attention to reproducible results in association studies obtained from small, albeit carefully characterized patient populations.
The Syilx Okanagan environmental ethic is a philosophy expressed in the practice of Indigeneity as a social (cultural) paradigm and is identified by an inter-reliant experience in the land, as demonstrated in land-use practice which is shaped by the land’s realities as observed, learned and communicated to succeeding generations. Syilx Okanagan Indigeneity reflects an epistemology that optimum human wellbeing cannot be achieved through a human centered ethic but must focus on the optimum ability for the environment to regenerate itself. Syilx Okanagan stories convey the social experience and act as a records system to preserve, maintain and transfer the knowledge of the land. On one level, captikwl contain essential specific environmental knowledge as an oral documentation method, while on another level, as literature, captikwl reconstructs the ethos of interdependency specific to the ecology of the Syilx Okanagan territory through reenactment of nature’s interactions. captikwl in the Nsyilxcen language mimics the dynamic aspects of nature’s required regenerative principles to each succeeding generation, and acts as a feed-back loop reconstructing the social paradigm as an environmental ethic. captikwl might be seen as a distinctly Indigenous human adaptive response scheme within a natural system as it constructs the Syilx Okanagan world and results in behavior with sustainable outcome in the environment. captikwl is a distinct oral artistry that must be read through a literary framework cognizant of oral memory device, structure and Syilx Okanagan context. Okanagan author Morning Dove’s collection of Okanagan stories, as well as, the Mattina and DeSautel bilingual collections and other original version captikwl were consulted. Captikwl demonstrates the concept of tmixw which better translates as a life-force. The word for land is tmxwulaxw, which translates better as a life-force-place, rather than land as location or ecology type. Syilx society demonstrates an “ecological conscience” as the common text through captikwl which is enacted in their social institutions in the manner theorized by respected American conservationist Aldo Leopold, as desirable to achieve within society. The Syilx environmental ethic, rather than a sustainable human ethic of utility, is a willingness to live within a strict imperative to continuously sustain a unity of existence through societal knowledge and reverent practice of respect toward all life-forms. The Syilx environmental ethic diverges from ecocentrism, as articulated by Callicott, in recognizing a fundamental distinction between non-life forms and life forms, in their ability for self-regeneration through inter-reliance, as the focus for delineating moral considerability. The Syilx environmental ethic differs from biocentrism, as articulated by Taylor, in recognizing moral considerability as resting with the on-going life form which is capable of regeneration within its ecology, rather than the singular biological unit. The Syilx environmental ethic also differs from the concept of the ethics of place, as articulated by Berthold-Bond and characterized as an ethical bioregional human utility of a location. Tmixw is the life-force which makes up the tmxwulaxw or life-force-place and the humans are only “placed” as a life-force themselves through Indigeneity as a social paradigm within a criteria of full reciprocity in the regeneration of all life forms of a place. The Syilx environmental ethic also differs from the ethic of sustainability proposed by Daly as a steady state economic model of human utilitarianism, in the positioning of nature treated as capital, to be prudently developed in a way that off-sets depletions of renewable and non-renewable resources in meeting human requirements. The Syilx Okanagan view of economy, while structurally a sustainability model, does not construct value based on human utility as a defining line in decision-making as to which life forms are to be devalued and displaced. Syilx Indigeneity is guided through a societal dialogue practice of Enowkinwixw, a process of decision-making structured to include living within the requirements of the land to fully regenerate. Syilx Okanagan Indigeneity frames an environmental ethic from a tmixwcentric position and offers a model proposing an ethic of re-indigenization as a path to sustainability. The thesis proposes a common text for human society in the form of such literatures, since literature is widely accessible, which demonstrate, imbed and advocate a regenerative land ethic towards the re-indigenization of place.
The aim of the present study was to construct a biological age score reflecting one’s physiologic capability and aging condition with respect to tooth loss over 10 y. From the follow-up to the population-based Study of Health in Pomerania (i.e., SHIP-2), 2,049 participants were studied for their baseline biomarker measures 10 y before (i.e., in SHIP-0). Metabolic and periodontal data were regressed onto chronological age to construct a score designated as “biological age.” For either sex separately, the impact of this individualized score was used to predict tooth loss in the follow-up cohort in comparison with each participant’s chronological age. Outcome data after 10 y with respect to tooth loss, periodontitis, obesity, and inflammation were shown to be better for biologically younger subjects than as expected by their chronological age, whereas for the older subjects, data were worse. Especially for tooth loss, a striking increase was observed in subjects whose biological age at baseline appeared to be higher than their chronological age. Biological age produced significantly better tooth loss predictions than chronological age (P < 0.001). Areas under receiver operating characteristic curves for tooth loss of ≥3 teeth in men during follow-up were 0.811 and 0.745 for biological and chronological age, respectively. For women, these figures were 0.788 and 0.724. For total tooth loss, areas under the curve were 0.890 and 0.749 in men and 0.872 and 0.752 in women. Biological age combines various measures into a single score and allows identifying individuals at increased risk of tooth loss.
The combination of the Layer-by-Layer (LbL) method, a nano-material such as carbon nanotubes (CNTs), and charged polyelectrolytes (PEs) is a reliable approach to produce highly functionalized surface coatings. These coatings are stable, controllable, ultra-thin, and most importantly, biocompatible. The ability to tune their properties by varying the preparation conditions and the terminating layer opens up a wide range of applications in the fields of biology and medicine. Here, the goal was to create electrically conductive coatings on which cells grow and proliferate. To achieve this goal, a coating with a stable conductive film structure, a suitable film surface topography, and suitable surface potential (and 𝜁-potential) must be prepared.
At the beginning of this thesis, the focus was on the fabrication of electrically conductive multilayer films, whose electrical properties should be stable and adjustable in a controlled manner (Article 1). The combination of chemically modified CNTs as polyanions, a strong linear polycation like poly(diallyldimethylammonium chloride) (PDADMA), and the LbL-method allowed us to prepare such films. Their characterization was carried out in air at ambient conditions. Since PDADMA is non-conductive, the charge transfer within the film and thus the electrical conductivity itself depends mainly on the CNTs and their arrangement. It was found that four CNT/PDADMA bilayers (BL) were always necessary to create a lateral network structure with multiple CNT crossing points to enable and support electron transport within the film. Moreover, additional CNT/PDADMA BL resulted in decreasing sheet resistance, while the conductivity remained constant at ≈ 4 kS/m regardless of the number of bilayers. Increasing the PDADMA molecular weight (Mw) from 44.4 kDa to 322 kDa did not affect film properties such as thickness or electrical conductivity.
However, increasing the CNT concentration from 0.15 mg/ml to 0.25 mg/ml in the deposition suspension resulted in thicker and less conductive films. This is attributed to a faster adsorption process of the CNTs leading to more adsorption sites for the polycation. We found an increased PDADMA monomer/CNT ratio compared to films prepared with the lower CNT concentration in the deposition suspension. The electrical conductivity decreased by a factor of four down to 1.1 kS/m, which can be attributed to fewer contact points between the CNTs. Overall, we were able to prepare stable and electrically conductive multilayer films. Additionally, by varying the preparation conditions tuning of the electrical conductivity is possible.
To fulfill requirements regarding i.e., medical implants, film properties not only have to be stable and controllable in a dry state (described in Article 1) but also in a biological aqueous environment. Therefore, in Article 2 we immersed our coated samples in three different solutions usually employed in biological research and compared their properties with their dry state, respectively. Also, hydration/swelling effects that normally occur for polyelectrolyte multilayer films (PEMs) in solutions were investigated.
For the film preparation, PDADMA (Mw = 322 kDa) and a deposition suspension of modified CNTs with two different concentrations (0.15 mg/ml and 0.25 mg/ml), which aged for two years, were used. Independent of the CNT suspension concentration, it turned out that the film thickness of the samples, prepared from the aged suspension, decreased significantly compared to the film thickness previously measured in Article 1. As a cross-check a new and fresh CNT suspension was made, which allowed us to reproduce the film thickness described in Article 1.
These results indicated that something happened with the CNT suspension over a two-year period. An analysis via X-ray photoelectron spectroscopy (XPS) showed a decrease in the percentage of functional groups in the CNTs from the aged suspension. The loss of functional groups resulted in less negatively charged CNTs and thus in fewer adsorption sites for the polycation PDADMA. Consequently, the PDADMA monomer/CNT ratio decreased, which lowered the thickness per bilayer by a factor of three, compared to films prepared with a freshly prepared CNT suspension. The lower linear charge density of the aged CNTs also enhanced their hydrophobicity, which is, in combination with the electrostatic forces, another important factor for multilayer cohesion. In contrast to PEMs made from polycations and polyanions, no swelling of the films occurred when immersed in solutions. This can be attributed to the fact that the increased hydrophobicity of the CNTs and the hydrophobic nature of the PDADMA backbone prevent the incorporation of water into the multilayer film. In solution, the films slightly shrink (by ≈ 2 nm), which makes them even more compact. Yet they remain stable. The result is an increased electrical conductivity from 9.6 kS/m, in the dry state, up to 15.3 kS/m immersed in solutions. To summarize, we showed that by tuning the interpolyelectrolyte forces the swelling and the ensuing decrease of the electrical conductivity of the films can be prevented.
Regarding the application in biology and medicine, we must consider that long-term exposure of cells to nano-materials like CNTs could lead to damage and inflammation of adjacent tissue. Therefore, it is necessary to prevent direct contact between the electrically conductive multilayer, i.e., CNT/PDADMA film, and the cells. The solution to this problem is a biocompatible top film that covers the CNT/PDADMA multilayer completely and still provides a lateral surface structure that supports cell adhesion and proliferation. Additional layers consisting solely of PEs could provide such a top film.
In Article 3 we investigated the self-patterning of PEM films as function of deposition steps. After preparation in water, the films were dried, characterized in air, and in vacuum. The films were built with high and low molecular weight PEs. PDADMA was used as polycation and poly(styrene sulfonate) sodium salt (PSS) as polyanion. The observation via Atomic Force Microscopy (AFM) showed that films prepared with high molecular weight PEs are laterally homogeneous and form no patterns, due to the chain immobility. The flat surfaces are ineligible as a substrate for cell adhesion.
In contrast, films built with a short PSS, especially at Mw, PSS = 10.7 kDa, began to self-pattern after seven deposited PDADMA/PSS bilayers. With each additionally deposited bilayer, the surface got more and more structured, from grooves over stripes to circular domains. Increasing film thickness led to an increased lateral mean distance between the surface structures. Scanning Electron Microscopy (SEM) images showed that exposure to a vacuum resulted in a decrease in the film thickness attributed to water removal, while the mean distance between the domains increased. Thus, by using this self-pattering process we are able to prepare PEMs with a highly structured surface. By adding PDADMA/PSS bilayers, not only the CNT/PDADMA film can be covered completely, but also a suitable surface morphology for cells can be created. Controlling the number of deposited bilayers allows the preparation of suitable coatings for cells.
To further improve the interaction of the cell and coated substrate not only the lateral structure but also the interacting electrostatic forces between cells and substrate are important for the nature of cell adhesion, function, and proliferation. In Article 4 we investigated PEMs, consisting of strong PEs with a low (PDADMA) and high (PSS) linear charge density. We performed asymmetric force measurements with the help of the colloidal probe technique (CP). Here, the forces between a PEM-covered surface and a colloidal probe (silica sphere) glued to a cantilever were investigated. The colloidal probe was either bare or covered with polycation poly(ethylenimine) (PEI). The surfaces were immersed in NaCl solutions with different ionic strengths (INaCl), starting with deionized water, then enriched up to 1 mol/L NaCl. The interaction force between a CP and the surface was measured. Thus, insight into the surface potential/charge was obtained.
During film preparation, two growth regimes (parabolic and linear) exist. These regimes and the terminating layer determine the surface force of the PEM. PEMs with a terminating PSS layer are predominantly flat and negatively charged when the ion concentration is low and the film is in the parabolic growth regime (between 1 and ≈ 15 BL). This indicates charge reversal on PSS adsorption. At the transition point between the parabolic and linear growth regimes, the ratio between polyanion and polycation monomers starts to switch and some cationic monomers are neutralized not by anionic monomers but by monovalent ions. Therefore, the surface charge density in diluted NaCl solutions changed from slightly positive near the transition to positive in the linear growth regime. At the lowest ionic strengths (INaCL) the range of the surface potential goes from – 40.5 mV (9 BL, parabolic) up to + 50 mV (19 BL, linear).
In contrast, polycation (PDADMA) terminated films are overall positive in diluted NaCl solutions. At the beginning of the parabolic growth regime, the layers are more compact and flat. However, with each additional layer deposited, the film becomes less compact and the chains begin to loosen. The now more loosely bound chains start to protrude into the solution and form pseudo-brushes. This could already be observed for 10.5 BL.
It intensifies in the linear growth regime (begin at ≈ 15 BL) and results in steric surface forces. Changing the surrounding INaCl affects this behavior and the pseudo-brushes scale as polyelectrolyte brushes.
By controlling the number of bilayers (thus the growth regime), the surrounding ionic strength, and the conformation of PEs at the PEM surface, it is possible to prepare a suitable range of surface properties i.e., for cell adhesion and proliferation. To prove that these multilayers can provide a suitable surface and have a positive effect on cell behavior, we coated in Article 5 titanium-covered samples with PEMs. Investigated was the cell interaction with the surface at different zeta(ζ) - potentials, a parameter for dynamic surface potential. Here the cell activity is measured by the mobilization of calcium (Ca2+) within the cell as a function of the ζ - potential of the substrate and the externally applied electrical potential. The cell activity indicates if the ζ - potential, provided by the sample surface, is suitable or not for the cells. The favorable interaction with the substrate is also reflected in the cell morphology and proliferation. The results showed that highly negative ζ - potentials between - 90 and - 3 mV led to a decreasing/reduced Ca2+ mobilization which correlates with reduced cell activity. Nearly neutral to moderate positive surfaces (ζ - potential + 1 to + 10 mV) i.e., PSS-terminated PEMs are able to promote cell adhesion and growth as demonstrated by an increased Ca2+ mobilization. The access to the intracellular Ca2+ stores, provided by the external stimulus, is now more effective and suggests a higher cell activity. Increasing the ζ - potentials up to ≈ + 50 mV (highly positive), i.e., PDADMA - terminated PEMs with pseudo-brushes, resulted in restricted cell viability and impaired Ca2+ mobilization, which led to a disturbed cell morphology and proliferation. In conclusion, only surfaces, terminated with i.e., PEI, with moderate positive charges (ζ - potential + 1 to + 10 mV) are able to improve the Ca2+ mobilization and thus the cell activity and proliferation. PEMs with a PSS termination provide negative 𝜁−potentials, onto which cells adhere, and proliferate. Therefore, they are a good alternative for surface functionalization for implant surfaces. In summary, the objective set at the beginning of the thesis is addressed within articles written as part of this thesis. It is possible to fabricate PEMs with modified CNTs to produce coatings that are electrically conductive with tunable sheet resistance, whether dry in air or immersed in an aqueous solution (Articles 1 and 2). Also, for pure PEMs, it is shown that with the right molecular weight of PEs and a certain number of bilayers, a suitable surface structure for cell adhesion can be produced (Article 3). Additional surface properties such as a suitable surface charge density can be provided by PEMs which can improve the cell activity as monitored with Ca2+ mobilization (Articles 4 and 5). The next step is to combine the knowledge gained from Articles 1 – 5 and link it to the application of external electrical fields to cells.
This study validates a newly-developed scale of consumer culture at individual-level in purchase-consumption context. Following unipolar approach in measurement, the applicable-reliable scale for consumer culture analyzes plausible effects of the seven cultural dimensions on three selected consumer-behaviors; anticipated regret, and two further purchase behaviors of variety-seeking and Quality-consciousness, comparing both Hedonic and Utilitarian aspect of consumer decisions. The interaction among the three behavioral variables are also studied. Feeling the necessity of cultural investigations in rather-unknown countries, Iran and Germany are focused.Iran is among the culturally undiscovered markets with an ever increasing demand; also German consumers have several unknown aspects in their purchase behaviors. Finally, the role of contextual elements — nationality, demographic profile and task— in consumer purchase behaviors are separately analyzed.
The purpose of this study was to compare the effect of culture on consumers’ attitudes toward Cause-Related marketing between Iran and Germany by answering the following questions:
A: What is consumer’s response concerning (1) skepticism toward CRM claim (2) attitude toward the CRM strategy, (3) attitude toward CRM brand personality, (4) attitude toward the CRM brand image and (5) CRM purchase intention (6) Warm glow? ; B: Do consumers respond differently to Cause-Related Marketing in Iran in comparison to Germany? C: Can cultural characteristics of the countries explain these differences? To answer the research questions, hypotheses were developed based on the literature which shape the research framework, in total containing 17 hypotheses. The data was gathered by questionnaire to make the research quantitative. By using convenience sampling, 564 responses were generated. The data was analysed by Structural Equation Modeling (SEM) and independent student t-test. Potential differences between Iran and Germany as well as moderation analysis are tested by critical ratio difference test as well as chi-square difference test using multiple- group analysis in AMOS. The results showed the importance of culture in applying CRM strategy. It can be said that CRM in a collectivistic culture like Iran can be successful as well as individualistic country like Germany. Although Iranian consumers were less familiar with this strategy, the benefits of CRM were similar in case of brand image and higher for purchase intention. The research found that emotions play a stronger role in Iran and it is more critical to evoke proper emotions by CRM campaign.
Cerebral cavernous malformations (CCM) are low-flow vascular lesions prone to cause severe hemorrhage-associated neurological complications. Pathogenic germline variants in CCM1, CCM2, or CCM3 can be identified in nearly 100% of CCM patients with a positive family history. In line with the concept that tumor-like mechanisms are involved in CCM formation and growth, we here demonstrate an abnormally increased proliferation rate of CCM3-deficient endothelial cells in co-culture with wild-type cells and in mosaic human iPSC-derived vascular organoids. The observation that NSC59984, an anticancer drug, blocked the abnormal proliferation of mutant endothelial cells further supports this intriguing concept. Fluorescence-activated cell sorting and RNA sequencing revealed that co-culture induces upregulation of proangiogenic chemokine genes in wild-type endothelial cells. Furthermore, genes known to be significantly downregulated in CCM3−/− endothelial cell mono-cultures were upregulated back to normal levels in co-culture with wild-type cells. These results support the hypothesis that wild-type ECs facilitate the formation of a niche that promotes abnormal proliferation of mutant ECs. Thus, targeting the cancer-like features of CCMs is a promising new direction for drug development.
Purpose
Oxidative stress has been linked to initiation and progression of cancer and recent studies have indicated a potential translational role regarding modulation of ROS in various cancers, including acute myeloid leukemia (AML). Detailed understanding of the complex machinery regulating ROS including its producer elements in cancer is required to define potential translational therapeutic use. Based on previous studies in acute myeloid leukemia (AML) models, we considered NADPH oxidase (NOX) family members, specifically NOX4 as a potential target in AML.
Methods
Pharmacologic inhibition and genetic inactivation of NOX4 in murine and human models of AML were used to understand its functional role. For genetic inactivation, CRISPR-Cas9 technology was used in human AML cell lines in vitro and genetically engineered knockout mice for Nox4 were used for deletion of Nox4 in hematopoietic cells via Mx1-Cre recombinase activation.
Results
Pharmacologic NOX inhibitors and CRISPR-Cas9-mediated inactivation of NOX4 and p22-phox (an essential NOX component) decreased proliferative capacity and cell competition in FLT3-ITD-positive human AML cells. In contrast, conditional deletion of Nox4 enhanced the myeloproliferative phenotype of an FLT3-ITD induced knock-in mouse model. Finally, Nox4 inactivation in normal hematopoietic stem and progenitor cells (HSPCs) caused a minor reduction in HSC numbers and reconstitution capacity.
Conclusion
The role of NOX4 in myeloid malignancies appears highly context-dependent and its inactivation results in either enhancing or inhibitory effects. Therefore, targeting NOX4 in FLT3-ITD positive myeloid malignancies requires additional pre-clinical assessment.
Purpose
The continuum of mental health/illness has been subject to scientific debate for decades. While current research indicates that continuum belief interventions can reduce mental health stigma and improve treatment seeking in affected populations, no study has yet systematically examined measures of continuum beliefs.
Methods
This preregistered systematic review summarizes measures of continuum beliefs. Following the PRISMA statement, three scientific databases (PubMed, PsycInfo and PsycArticles via EBSCOhost, Web of Science) are searched, instruments are described and discussed regarding their scope, and methodological quality.
Results
Overall, 7351 records were identified, with 35 studies reporting relevant findings on 11 measures. Most studies examined general population samples and used vignette-based measures. Schizophrenia and depression were most commonly examined, few studies focused on dementia, ADHD, OCD, eating disorders, and problematic alcohol use, or compared continuum beliefs across disorders. Validity was very good for most measures, but reliability was rarely tested. Measures mostly assessed beliefs in the normality of mental health symptoms or the normality of persons with such symptoms but rarely nosological aspects (i.e., categorical v continuous conceptualization of mental disorders).
Conclusions
Current research provides psychometrically sound instruments to examine continuum beliefs for a variety of mental disorders. While studies suggest utility for general population samples and mental health professionals, more research is necessary to corroborate findings, for instance, regarding age (e.g., in adolescents), gender, or type of mental disorder. Future research should also compare self-report ratings, and vignette-based measures, include measures of nosological concepts to fully grasp the continuum concept of mental illness.
Preregistration
PROSPERO: CRD42019123606.
Abstract
Monitoring the general public's support toward wildlife species is a strategy to identify whether a specific human–wildlife conflict (HWC) is escalating or de‐escalating over time. The support can change due to multiple factors, such as mass media news of HWC or providing information about ecological traits of a species. Methods such as the rating scale (RS) and the allocation of a fixed amount of money (money allocation [MA]) have been used in the human–wildlife dimension as a proxy to measure support toward wildlife species. We compared these two methods' capacity to assess the general public's support changes toward wildlife species in an experimental design setting. Face‐to‐face interviews were applied among urban dwellers (n: 359) in Valdivia, Chile. In each interview, the support toward 12 wildlife species was elicited using an RS and MA methods, on two occasions, before and after disclosing ecological traits of the species. The results indicate that the MA grouped the wildlife species based on shared ecological traits, information disclosed to the participants, while the RS did not obtain the same results. Specifically, the MA identified an increase and decrease of support toward the wildlife species, and the RS only an increment of support. These results could be partly explained due to the conceptual foundation of each method. The MA was designed to elicit preferences in a constrained choice, while the RS measures attitudes. As a constrained choice, the MA does allow maximum support to be given to one species only if all other species are left unsupported, while in the RS, it is possible to provide maximum support for all species. The mentioned characteristics of the MA make it more suitable than the RS when the objective is to identify support changes.
A successful colonization of different compartments of the human host requires multifactorial contacts between bacterial surface proteins and host factors. Extracellular matrix proteins and matricellular proteins such as thrombospondin-1 play a pivotal role as adhesive substrates to ensure a strong interaction with pathobionts like the Gram-positive Streptococcus pneumoniae and Staphylococcus aureus. The human glycoprotein thrombospondin-1 is a component of the extracellular matrix and is highly abundant in the bloodstream during bacteremia. Human platelets secrete thrombospondin-1, which is then acquired by invading pathogens to facilitate colonization and immune evasion. Gram-positive bacteria express a broad spectrum of surface-exposed proteins, some of which also recognize thrombospondin-1. This review highlights the importance of thrombospondin-1 as an adhesion substrate to facilitate colonization, and we summarize the variety of thrombospondin-1-binding proteins of S. pneumoniae and S. aureus.
Type I interferonopathies cover a phenotypically heterogeneous group of rare genetic diseases including the recently described proteasome-associated autoinflammatory syndromes (PRAAS). By definition, PRAAS are caused by inherited and/or de novo loss-of-function mutations in genes encoding proteasome subunits such as PSMB8, PSMB9, PSMB7, PSMA3, or proteasome assembly factors including POMP and PSMG2, respectively. Disruption of any of these subunits results in perturbed intracellular protein homeostasis including accumulation of ubiquitinated proteins which is accompanied by a type I interferon (IFN) signature. The observation that, similarly to pathogens, proteasome dysfunctions are potent type I IFN inducers is quite unexpected and, up to now, the underlying molecular mechanisms of this process remain largely unknown. One promising candidate for triggering type I IFN under sterile conditions is the unfolded protein response (UPR) which is typically initiated in response to an accumulation of unfolded and/or misfolded proteins in the endoplasmic reticulum (ER) (also referred to as ER stress). The recent observation that the UPR is engaged in subjects carrying POMP mutations strongly suggests its possible implication in the cause-and- effect relationship between proteasome impairment and interferonopathy onset. The purpose of this present review is therefore to discuss the possible role of the UPR in the pathogenesis of PRAAS. We will particularly focus on pathways initiated by the four ER-membrane proteins ATF6, PERK, IRE1-a, and TCF11/Nrf1 which undergo activation under proteasome inhibition. An overview of the current understanding of the mechanisms and potential cross-talk between the UPR and inflammatory signaling casacades is provided to convey a more integrated picture of the pathophysiology of PRAAS and shed light on potential biomarkers and therapeutic targets.
Type I interferonopathies cover a phenotypically heterogeneous group of rare genetic diseases including the recently described proteasome-associated autoinflammatory syndromes (PRAAS). By definition, PRAAS are caused by inherited and/or de novo loss-of-function mutations in genes encoding proteasome subunits such as PSMB8, PSMB9, PSMB7, PSMA3, or proteasome assembly factors including POMP and PSMG2, respectively. Disruption of any of these subunits results in perturbed intracellular protein homeostasis including accumulation of ubiquitinated proteins which is accompanied by a type I interferon (IFN) signature. The observation that, similarly to pathogens, proteasome dysfunctions are potent type I IFN inducers is quite unexpected and, up to now, the underlying molecular mechanisms of this process remain largely unknown. One promising candidate for triggering type I IFN under sterile conditions is the unfolded protein response (UPR) which is typically initiated in response to an accumulation of unfolded and/or misfolded proteins in the endoplasmic reticulum (ER) (also referred to as ER stress). The recent observation that the UPR is engaged in subjects carrying POMP mutations strongly suggests its possible implication in the cause-and-effect relationship between proteasome impairment and interferonopathy onset. The purpose of this present review is therefore to discuss the possible role of the UPR in the pathogenesis of PRAAS. We will particularly focus on pathways initiated by the four ER-membrane proteins ATF6, PERK, IRE1-α, and TCF11/Nrf1 which undergo activation under proteasome inhibition. An overview of the current understanding of the mechanisms and potential cross-talk between the UPR and inflammatory signaling casacades is provided to convey a more integrated picture of the pathophysiology of PRAAS and shed light on potential biomarkers and therapeutic targets.
Coding constraints imposed by the very small genome sizes of negative-strand RNA viruses (NSVs) have led to the development of numerous strategies that increase viral protein diversity, enabling the virus to both establish a productive viral replication cycle and effectively control the host antiviral response. Arenaviruses are no exception to this, and previous findings have demonstrated that the nucleoprotein (NP) of the highly pathogenic Junín virus (JUNV) exists as three additional N-terminally truncated isoforms of 53 kD (NP53kD), 47 kD (NP47kD), and 40 kD (NP40kD). The two smaller isoforms (i.e. NP47kD and NP40kD) have been characterized as products of caspase cleavage, which appears to serve a decoy function to inhibit apoptosis induction. However, whether they have additional functions in the viral replication cycle remains unknown. Further, the origin and function of NP53kD has not yet been described.
In order to first identify the mechanism responsible for production of the NP53kD variant, a possible role of additional caspase cleavage sites was first excluded using a site mutagenesis approach. Subsequently, alanine mutagenesis was then used to identify a region responsible for NP53kD production. As a result, three methionine residues were identified within the characterized sequence segment of NP, linking the production of NP53kD to an alternative in-frame translation initiation. Further site-directed mutagenesis of the previously identified putative in-frame methionine codons (i.e. M78, M80 and M100) finally led to the identification of translation initiation at M80 as being predominantly responsible for the production of NP53kD. Once the identity of all three NP isoforms was known, it was then of further interest to more deeply characterize their functional roles. Consistent with the N-terminal domain containing RNA binding and homotrimerization motifs that are relevant for the viral RNA synthesis process, it could be demonstrated that all three truncated NP isoforms lost the ability to support viral RNA synthesis in a minigenome assay. However, they also did not interfere with viral RNA synthesis by full-length NP, nor did they affect the ability of the matrix protein Z to inhibit viral RNA synthesis. Moreover, it was observed that loss of the oligomerization motifs in the N-terminus also affected the subcellular localization of all three NP isoforms, which were no longer localized in discrete perinuclear inclusion bodies, but rather showed a diffuse distribution throughout the cytoplasm, with the smallest isoform NP40kD also being able to enter the nucleus. Surprisingly, the 3'-5' exonuclease function of NP, which is associated with the C-terminal domain and plays a role in inhibiting interferon induction by digestion of double-stranded RNAs, was found to be retained only by the NP40kD isoform, despite that all three isoforms retained the associated domain. Finally, previous studies using transfected NP and chemical induction of apoptosis have suggested that cleavage of NP at the caspase motifs responsible for generating NP47kD and NP40kD plays a role in controlling activation of the apoptosis pathway. Therefore, to further characterize the connection between the generation of NP isoforms and the regulation of apoptosis in a viral context, recombinant JUNVs deficient in the respective isoforms were generated. Unlike infections with wild-type JUNV, mutations of the caspase cleavage sites resulted in the induction of caspases activation. Surprisingly, however, this was also the case for mutation of the alternate start codon responsible for NP53kD generation.
Taken together, the data from this study suggest a model whereby JUNV generates a pool of smaller NP isoforms with a predominantly cytoplasmic distribution. As a result of this altered localization, NP53kD appears to be able to serve as the substrate for further generation of NP47kD and NP40kD by caspase cleavage. Not only does this cleavage inhibit apoptosis induction during JUNV infection, it also results in a cytoplasmic isoform of NP that retains strong 3'-5' exonuclease activity (i.e. NP40kD) and thus may play an important role in preventing viral double-stranded RNA accumulation in the cytoplasm, where it can lead to activation of IFN signaling. Overall, such results emphasize the relevance of alternative protein isoforms in virus biology, and particularly in regulation of the host response to infection.
Increasing environmental changes primarily due to anthropogenic impacts, are affecting organisms all over the planet. In general, scientists distinguish between three different ways in which organisms can respond to environmental changes in their habitat: extinction, dispersal and adaptation. An example of organisms which are highly adaptable and can easily cope with new and changing environments are invasive species which are able to colonize new habitats with only few individuals. To successfully survive in their new environment, invasive species adapt fast to novel abiotic and biotic parameters, such as different temperature regimes. Phenotypic plasticity which enables organisms to quickly modify their phenotype to new environmental conditions, explains the success in adaptation of invasive species.
While underlying mechanisms of phenotypic plasticity are not fully understood, one possible “motor” of phenotypic plasticity is epigenetics. Especially DNA methylation could explain the fast changes of the organism’s phenotype due to plasticity when experiencing changing environments, as invasive species do. DNA methylation could even contribute to the adaptation of invasive species via phenotypic plasticity, especially with clonally reproducing species. Methods such as common garden experiments with clonally reproducing species are a useful tool to differentiate between phenotypic plasticity and genetic adaptation because the confusing effects of genetic variation are lowered in clonally reproducing species.
Our overall goal was to evaluate the genetic adaptive potential of New Zealand mud snail (Potamopyrgus antipodarum) populations from Europe since they went through an extreme bottleneck after colonizing Europe only 180-360 generations ago. Seemingly, two different clonal lineages colonized Europe because two 16 s rRNA and cytochrome b haplotypes were found across different European countries, haplotypes t and z. The NZMS is a highly successful invasive species that is nowadays nearly globally distributed. The shells of the NZMS show a habitat-dependent high variability and are a fitness-relevant trait. The high variability in shell morphology is due to both genetic variation and phenotypic plasticity. To disentangle genetic from environmental effects on the shell morphology NZMS, we conducted a common garden experiment. We kept asexually reproducing females from eleven European populations in climate cabinets with three different temperatures to produce offspring. We compared shell size and shape across three generations using the geometric morphometrics approach. Furthermore, we estimated reaction norms, maternal effects, broad-sense heritability, the coefficient of genetic variation (CVA) and evolvability (IA) in shell size and shape across different temperature conditions. Additionally, we investigated the reproductive rate of the parental generation.
Results showed that the shell morphology of the parental generation differed across populations. In contrast, the shell morphology of offspring generations became more similar. The reaction norms of the F1 generation were rather variable across the three temperatures. However, we were able to observe a haplotype-dependent pattern across the reaction norms suggesting a restricted genetic differentiation among NZMS in Europe. We detected high heritability values in size indicating a high genetic influence. Heritability values for shape were lower than in size. Generally, heritability varied slightly depending on temperature. Size seemed to have a higher evolvability than shape. However, the values of all our calculations were very low which indicates that the European NZMS populations are genetically diminished. The reproductive rate of the parental generation was rather haplotype than temperature dependent. In summary, we were able to display that the NZMS is capable to plastically adapt its shell morphology to different temperatures showing significant differences between the two haplotypes. Nevertheless, the low evolvability values indicate that little genetic variation has formed since the arrival of the NZMS in Europe and therefore, European NZMS seem to have a reduced ability to react to selection.
These results implied that phenotypic plasticity is important for the adaptation to different environmental conditions in the NZMS and maybe other molluscan species. Since classical experimental approaches can only describe the resulting phenotypes, we also intended to shed more light on the mechanistic side of environmentally induced phenotypic modifications using DNA methylation analysis. Although molluscs represent one of the most diverse taxa within the metazoan and are found in many different habitats, our knowledge of the DNA methylation in molluscs is scarce. Therefore, we aimed at deepening and summarizing our understanding about DNA methylation in molluscs. Publicly available molluscan genomic and transcriptomic data of all eight mollusc classes was downloaded to search for DNA methyltransferases (DNMTs 1-3) responsible for DNA methylation. Additionally, we estimated the normalized CpG dinucleotide content (CpG o/e) indicating the presence/absence and the frequency of DNA methylation in the genome. The CpG o/e ratio refers to the level of DNA methylation in the genome. Based on the sensitivity of methylated cytosines to mutate into thymine residues, species having a high germline methylation in genomic regions over evolutionary time, also have a lower CpG content, which is called CpG depletion. In contrary, species with a limited germline methylation in genomic regions over evolutionary time, show a higher CpG content and lack CpG depletion. The presence or absence of CpG depletion can be calculated with the CpG o/e ratio. Ultimately, the goal of our analyses was to gain insight into the evolution of methylation in molluscs.
We detected DNMTs in all eight mollusc classes and in most of the species. It is therefore plausible that the last common ancestor of molluscs has already had the enzymatic machinery which is needed for DNA methylation. However, various species did not possess the complete DNMT toolkit indicating evolutionary modification in DNA methylation. In general, we found a wide distribution of the bimodal CpG o/e pattern in six mollusc classes, resulting from CpG depletion. The genes in these groups seem to be divided into genes with a high degree of methylation and genes with a lower degree of methylation. This implies that DNA methylation seems to be rather common in molluscs. Species of Solenogastres and Monoplacophora were not or only sparsely methylated. It seems that those mollusc groups have undergone a reduction in DNA methylation. We hope that our investigations will demonstrate the lacking knowledge in epigenetics of molluscs and encourage scientist to execute and continue genetic studies on molluscs.
The LINC (Linker of Nucleo- and Cytoskeleton) complex is an evolutionarily conserved complex of nuclear envelope (NE) proteins that forms a direct connection between the nucleoskeleton and cytoskeleton. Primarily, members of two protein families form the complex: SUN and giant nesprin isoforms that reside in the inner and outer nuclear membrane, respectively, thus forming a “bridge” across the NE. Lamin A/C and emerin are additional LINC complex components. Mutations in the genes encoding the LINC complex components have been associated with at least a dozen diseases, the majority of them muscular diseases. Emery-Dreifuss muscular dystrophy (EDMD), an inherited neuromuscular disorder with variable clinical presentation, is one of these diseases. But only around 46% of all EDMD patients are linked to a disease allele. Except of SUN1 and SUN2 all known LINC complex components had been associated with EDMD. Following a functional candidate gene approach the SUN1 and SUN2 genes were sequenced in a cohort of pseudoanonymized 175 EDMD patients without a known mutation and 70 patients with known causative mutations in other LINC components. Based on these results the pathomechanism causing the phenotype in patients with SUN1 or SUN2 mutations was investigated. Autosomal recessive inheritance was observed in one patient with compound heterozygous SUN1 mutations. Patient myoblasts showed defective protein interactions within the LINC complex, altered mRNA expression levels of some LINC components, an enhanced differentiation rate and defects in myonuclear organization. This provides first insights into a new pathomechanism based on weakening of the LINC complex and resulting in disruption of myonuclear alignment. In six patients with known EMD or LMNA mutations additional heterozygous SUN1 or SUN2 mutations modifying the disease have been identified, causing a significantly more severe course. Thus the modifying effect of SUN mutations found in the present study helps to explain the clinical intra- and interfamilial variability observed in EDMD. Further evidence for the influence of mutations in LINC complex components on the molecular pathology of muscular dystrophies comes from a study on primary fibroblasts of a patient suffering Duchenne muscular dystrophy (DMD) and of a patient showing signs of EDMD and Charcot-Marie-Tooth syndrome (CMT). The DMD patient had apart from a mutation in the DMD gene two variants in genes encoding the LINC components nesprin 1α2 and SUN1. The EDMD/CMT patient carried two variants in nesprin 1α1 and SUN2. Fibroblasts of both patients showed changes in cell adhesion, cell migration, senescence and stress response as well as characteristics typical for laminopathies like changes in nuclear shape and NE composition. Mutations in genes encoding LINC complex proteins are also associated with a number of other diseases. Pleiotropic LMNA mutations have also been linked with progeroid syndromes – genetic diseases that mimic clinical and molecular features of aging including Hutchinson Gilford progeria syndrome (HGPS), mandibuloacral dysplasia (MAD), restrictive dermopathy (RD) and atypical Werner’s syndrome (aWS) as well as a couple of overlapping phenotypes. MAD and RD can also be caused by mutations in ZMPSTE24, a gene encoding the ZMPSTE24 metalloproteinase necessary for the processing of prelamin A to mature lamin A. It is expected that insights into the pathomechanism of this group of diseases might provide clues to normal aging process. Analyzing RD and MAD patients for mutations in the ZMPSTE24 gene, some novel mutations have been identified. Based on this results and a review of the literature regarding ZMPSTE24 mutations could be shown that all mutations involved in RD are null mutations, whereas all patients with MAD are compound heterozygotes carrying one loss-of-function mutation and one missense mutation. This shows a clear genotype-phenotype correlation. A further part of this work is the description of the molecular genetics and functional background of a rare, unclassified progeroid syndrome. The clinical course of the affected patient appeared as an accelerated HGPS finally ending up in a delayed RD with overlapping clinical features of MAD. Mutational analysis revealed a homozygous LMNA mutation caused by a partial uniparental disomy of chromosome 1. Immunohistological analyses of tissue samples taken at the beginning and the end of the disease course showed a decreasing amount of lamin A and increasing amounts of DNA double strand breaks. Functional analysis in transfected human normal fibroblasts showed an impaired ability of the mutant lamin A to recruit 53BP1, a component of the DNA repair pathway, to damaged DNA sites. This case provides the first evidence of human lamin A direct involvement in DNA repair and that increased DNA damage is a major pathophysiological factor in progeroid laminopathies.
Certain basal Teleostei from the Early Jurassic of Mecklenburg-Western Pomerania (Germany) and the Late Jurassic of the Franconian Alb (Bavaria, Germany), the Swabian Alb (Baden-Württemberg, Germany) and the western Jura-Mountains (Ain, France) are described. The present doctoral dissertation includes four studies, dealing with representatives of “Pholidophoriformes”, Leptolepidae and Orthogonikleithridae. These studies include anatomical descriptions of new taxa and reviews of poorly known fishes. Furthermore, the stratigraphic and palaeobiogeographical distributions of the examined taxa are discussed.
This thesis delves into some very important scientific challenges for the stellarator concept as a whole and W7-X in particular, namely, how one effectively interfaces the hot plasma with the material walls of the experiment, in special how the plasma heat and particle fluxes are controlled. The fundamental concept that will be used in W7-X for particle and heat exhaust is the island divertor. A number of theoretical and numerical studies have been performed to guide the design of the divertor components. The actual divertor components are in series production at this time, and are largely compatible with the expected heat loads. However, with the sophisticated codes now available, it has become clear that there are some, otherwise very attractive, operational scenarios that could lead to overloading of the W7-X divertors. At least one mitigation strategy was proposed but was until now not analyzed in sufficient detail. In this thesis, state-of-the-art codes are used to analyze this previously proposed mitigation strategy; they are also used to develop several alternative mitigation schemes, which may in the end be advantageous. The work performed here shows not only that it is conceivable to solve this already identified problem in new and arguably better ways but also that the W7-X coil set has enough degrees of freedom that many important long-pulse plasma effects can be effectively mimicked in short-pulse operation. This opens up a rich research program in the early phases of operation and may therefore lead to a significant acceleration of the scientific program to control and optimize the divertor operation in W7-X. The main scientific challenge for the island divertor operation in W7-X is that, since the divertor geometry is now fixed, the magnetic field structure must be adjusted to the divertor geometry, or additional plasma-facing components must be manufactured and installed. Well before this thesis work was done, such additional plasma-facing components were proposed. These are called scraper elements (SEs). As a part of this work, computer simu- lations were performed in order to obtain a better knowledge base regarding the SEs. To analyze the effect of the SE, edge plasma physics simulation code EMC3-Eirene, was used, in combination with state-of-the-art magneto hydrodynamic (MHD) equilibrium codes. This combination was computationally non-trivial and new, and it has led to important insights. One main result of this study is that the SEs significantly reduce the particle exhaust capabilities in steady state operation; this is a concern for W7-X. To test and further quantify this deleterious effect, physics experiments with a prototype SE should be performed as soon as possible, ideally in the first operation campaigns before the approximately two-year break needed to complete W7-X for steady-state operation. In 3 this first operation phase, however, the necessary combination of plasma parameters, heating power, and achievable pulse length is not accessible. This means, on the one hand, that the problem described will not be present in the first operation phase; on the other hand, the physics implications of installing an SE would appear not to be experimentally testable in that phase. One major finding of this thesis is that the coil system of W7-X is flexible enough to allow such an early experimental test. Different stages of high performance long-pulse discharge can be effectively mimicked in the experiment by a targeted use of the available coil sets. Thus, even in the early phases of the W7-X program one can assess both the protection capabilities of the SEs and their effects on particle exhaust and plasma performance in general. These mimic scenarios also have the potential to test other possibilities for divertor pro- tection besides the SE. Such strategies are addressed in this thesis. The two most promising strategies identified here can be classified as plasma shift and iota control. Both adjust the edge magnetic field to better fit the divertor geometry. This is done slowly but dynamically — i.e. during a long plasma discharge.
The thesis deals with ions stored in an electrostatic ion beam trap. In the first part of the thesis the so-called self-synchronization effect is discussed. It is demonstrated that the time a bunch of injected ions is conserved by the self-synchronization effect depends on the number of injected ions. In the second part of the thesis the cooling of small anionic cobalt and copper clusters is addressed. Measurements on anionic copper clusters consisting of four to seven atoms are presented and the decay of hot clusters is observed in order to draw conclusions on the internal temperature and the cooling process itself. Afterwards measurements on Co4- are discussed and a measurement scheme based on laser induced delayed electron emission is presented enabling to monitor the internal energy distribution of the clusters over storage time in a temperature-controlled environment. The cooling of initially hot clusters as well as the heating of initially cold clusters were observed.
Copattern of depression and alcohol use in medical care patients: cross- sectional study in Germany
(2020)
Objective
To predict depressive symptom severity and presence of major depression along the full alcohol use continuum.
Design
Cross-sectional study.
Setting
Ambulatory practices and general hospitals from three sites in Germany.
Participants
Consecutive patients aged 18–64 years were proactively approached for an anonymous health screening (participation rate=87%, N=12 828). Four continuous alcohol use measures were derived from an expanded Alcohol Use Disorder Identification Test (AUDIT): alcohol consumption in grams per day and occasion, excessive consumption in days per months and the AUDIT sum score. Depressive symptoms were assessed for the worst 2-week period in the last 12 months using the Patient Health Questionnaire (PHQ-8). Negative binomial and logistic regression analyses were used to predict depressive symptom severity (PHQ-8 sum score) and presence of major depression (PHQ-8 sum score≥10) by the alcohol use measures.
Results
Analyses revealed that depressive symptom severity and presence of major depression were significantly predicted by all alcohol use measures after controlling for sociodemographics and health behaviours (p<0.05). The relationships were curvilinear: lowest depressive symptom severity and odds of major depression were found for alcohol consumptions of 1.1 g/day, 10.5 g/occasion, 1 excessive consumption day/month, and those with an AUDIT score of 2. Higher depressive symptom severity and odds of major depression were found for both abstinence from and higher levels of alcohol consumption. Interaction analyses revealed steeper risk increases in women and younger individuals for most alcohol use measures.
Conclusion
Findings indicate that alcohol use and depression in medical care patients are associated in a curvilinear manner and that moderation by gender and age is present.
For decades, evolutionary biologists have sought to understand the evolution of individual behaviour, physiology and ecology allowing organisms to cope to environmental change. One of the main challenges of current climate change is the unprecedent rate of temperature increase, as well as the increased occurence of extreme heat events. Interindividual response variability opens a whole new area of opportunities to understand how individual phenotypic traits are linked to individual response differences. In colour polymorphic species, colour honestly reflects an individual’s life-history strategy, and each morph may, therefore, represent an alternative life-history strategy. As such, colour polymorphic species, such as the Gouldian finch (Erythrura gouldiae), may be good models to assess how different strategies between morphs are linked to their espective responses to environmental variations. However, polymorphic species have mainly been disregarded for that purpose. In this context, the main aim of this thesis was to understand how the two morphs of the Gouldian finch respond through phenotypic plasticity to simulated heatwaves reaching thermocritical temperatures, and whether such differential responses may help to identify a ‘winner’ and a ‘loser’ morph in the light of climate change. To address these issues, we used an integrative approach including measurements of behavioural (Study 1), physiological (Study 2), and reproductive (Study 3) parameters. The novelty of our approach was to assess the immediate behavioural and physiological response variation of individuals of the two morphs longitudinally across different thermal conditions, as well as the postponed effects of this thermocritical heatwave exposure on their reproductive performance. In this study, although the behavioural responses generally did not differ between morphs or according to temperature intensity, the physiological and reproductive parameters differed in response to morph and temperature intensity. Blackheaded females, in particular, seem highly sensitive to thermocritical heatwaves, as they exhibited decreased body mass and increased oxidative damage during the thermocritical heatwaves, and advanced breeding initiation after these conditions, whereas these variables remained mostly unaffected in black-headed males and red-headed individuals. However, despite some response differences between morphs, both invested similarly in reproduction following intense heatwaves, and the offspring of both morphs were similarly affected. Based on these results, no morph therefore seems to appear more disadvantaged than the other following an intense heatwave, and red- and black-headed Gouldian finches may both be considered as climate stress ‘losers’.
The male genitalia of pholcid spiders, which is one of the most species-rich spider families, are characterized by a procursus, which is a morphologically diverse projection of the copulatory organ. It has been shown that the procursus interacts with the female genitalia during copulation. Here, we investigate the function of the procursus in Gertschiola neuquena, a species belonging to the early branched and understudied subfamily Ninetinae, using behavioural and morphological data. Although many aspects of the copulatory behaviour of G. neuquena follow the general pattern described for the family, males use only one pedipalp during each copulation. Based on our micro-CT analysis of cryofixed mating pairs using virgin females, we can show that the long and filiform procursus is inserted deeply into the unpaired convoluted female spermatheca, and the intromittent sclerite, the embolus, is rather short and stout only reaching the most distal part of the female sperm storage organ. Histological data revealed that sperm are present in the most proximal part of the spermatheca, suggesting that the procursus is used to allocate sperm deeply into the female sperm storage organ. This represents the first case of a replacement of the sperm allocation function of the intromittent sclerite in spiders.
Copulatory mechanics of ghost spiders reveals a new self-bracing mechanism in entelegyne spiders
(2023)
Spiders evolved a distinctive sperm transfer system, with the male copulatory organs located on the tarsus of the pedipalps. In entelegyne spiders, these organs are usually very complex and consist of various sclerites that not only allow the transfer of the sperm themselves but also provide a mechanical interlock between the male and female genitalia. This interlocking can also involve elements that are not part of the copulatory organ such as the retrolateral tibial apophysis (RTA)—a characteristic of the most diverse group of spiders (RTA clade). The RTA is frequently used for primary locking i.e., the first mechanical engagement between male and female genitalia. Despite its functional importance, some diverse spider lineages have lost the RTA, but evolved an apophysis on the femur instead. It can be hypothesized that this femoral apophysis is a functional surrogate of the RTA during primary locking or possibly serves another function, such as self-bracing, which involves mechanical interaction between male genital structures themselves to stabilize the inserted pedipalp. We tested these hypotheses using ghost spiders of the genus Josa (Anyphaenidae). Our micro-computed tomography data of cryofixed mating pairs show that the primary locking occurs through elements of the copulatory organ itself and that the femoral apophysis does not contact the female genitalia, but hooks to a projection of the copulatory bulb, representing a newly documented self-bracing mechanism for entelegyne spiders. Additionally, we show that the femoral self-bracing apophysis is rather uniform within the genus Josa. This is in contrast to the male genital structures that interact with the female, indicating that the male genital structures of Josa are subject to different selective regimes.
This work investigates turbulence in the core plasma of the optimised stellarator
Wendelstein 7-X. It focuses on experimental characterisation and
evaluation of the electrostatic micro-instabilities, which drive turbulent fluctuations,
and the saturation of turbulence by zonal flows. Expectations for
Wendelstein 7-X are formulated by reviewing theoretical work and with
the help of gyrokinetic simulations. The experimental analysis centres on
line-integrated density fluctuation measurements with the phase contrast
imagining diagnostic in electron cyclotron heated hydrogen discharges. An
absolute amplitude calibration was implemented, and a method for reliable
determination of dominant phase velocities in wavenumber-frequency
spectra of density fluctuations has been developed. Line-averaged density
fluctuation levels are observed to vary between magnetic configurations.
The wavenumber spectra exhibit a dual cascade structure, indicating fully
developed turbulence. The dominant instability driving turbulent density
fluctuations on transport relevant scales is identified as ion-temperaturegradient-
driven modes, which are mainly localised in the edge region of the
confined plasma. Despite the line-integrated nature of the measurement, the
localisation of density fluctuations is shown by comparing their dominant
phase velocity with the radial profile of the E × B rotation velocity due to
the ambipolar neoclassical electric field. Nonlinear gyrokinetic simulations
and a simplified plasma rotation model within a synthetic diagnostic confirm
the localisation. Oscillations of the dominant phase velocity indicate
the existence of zonal flows as a saturation mechanism of ion-temperaturegradient-
driven turbulence. A direct effect on turbulent density fluctuation
amplitudes and radial transport is observed.
Background: Invasive cardiopulmonary exercise testing (iCPET) is an integral part in the advanced diagnostic workup of pulmonary hypertension (PH). Our study evaluated the relation between hemodynamic and respiratory parameters at two different resting conditions and two defined low exercise levels with a close synchronization of measurements in a broad variety of dyspnea patients. Subjects and methods: We included 146 patients (median age 69 years, range 22 to 85 years, n = 72 female) with dyspnea of uncertain origin. Invasive hemodynamic and gas exchange parameters were measured at rest, 45° upright position, unloaded cycling, 25 and 50 W exercise. All measurements were performed in a single RHC procedure. Results: Oxygen uptake (VO2/body mass) correlated significantly with cardiac index (all p ≤ 0.002) at every resting and exercise level and with every method of cardiac output measurement (thermodilution, method of Fick). Mean pulmonary arterial pressure (PAPmean) correlated with all respiratory parameters (respiratory rate, partial end-tidal pressures of oxygen and carbon dioxide [petCO2 and petO2], ventilation/carbon dioxide resp. oxygen ratio [VE/VCO2, VE/VO2], and minute ventilation [VE], all p < 0.05). These correlations improved with increasing exercise levels from rest via unloaded cycling to 25 W. There was no correlation with right atrial or pulmonary arterial wedge pressure. Summary: In dyspnea patients of different etiologies, the cardiac index is closely linked to VO2 at every level of rest and submaximal exercise. PAPmean is the only pressure that correlates with different respiratory parameters, but this correlation is highly significant and stable at rest, unloaded cycling and at 25 W.
The utilization of fluorescein-guided biopsies has recently been discussed to improve and expedite operative techniques in the detection of tumor-positive tissue, as well as to avoid making sampling errors. In this study, we aimed to report our experience with fluorescein-guided biopsies and elucidate distribution patterns in different histopathological diagnoses in order to develop strategies to increase the efficiency and accuracy of this technique. We report on 45 fluorescence-guided stereotactic biopsies in 44 patients (15 female, 29 male) at our institution from March 2016 to March 2021, including 25 frame-based stereotactic biopsies and 20 frameless image-guided biopsies using VarioGuide®. A total number of 347 biopsy samples with a median of 8 samples (range: 4–18) per patient were evaluated for intraoperative fluorescein uptake and correlated to definitive histopathology. The median age at surgery was 63 years (range: 18–87). Of the acquired specimens, 63% were fluorescein positive. Final histopathology included glioblastoma (n = 16), B-cell non-Hodgkin lymphoma (n = 10), astrocytoma, IDH-mutant WHO grade III (n = 6), astrocytoma, IDH-mutant WHO grade II (n = 1), oligodendroglioma, IDH-mutant and 1p/19q-codeleted WHO grade II (n = 2), reactive CNS tissue/inflammation (n = 4), post-transplantation lymphoproliferative disorder (PTLD; n = 2), ependymoma (n = 1), infection (toxoplasmosis; n = 1), multiple sclerosis (n = 1), and metastasis (n = 1). The sensitivity for high-grade gliomas was 85%, and the specificity was 70%. For contrast-enhancing lesions, the specificity of fluorescein was 84%. The number needed to sample for contrast-enhancing lesions was three, and the overall number needed to sample for final histopathological diagnosis was five. Interestingly, in the astrocytoma, IDH-mutant WHO grade III group, 22/46 (48%) demonstrated fluorescein uptake despite no evidence for gadolinium uptake, and 73% of these were tumor-positive. In our patient series, fluorescein-guided stereotactic biopsy increases the likelihood of definitive neuropathological diagnosis, and the number needed to sample can be reduced by 50% in contrast-enhancing lesions.
Abstract
Aim
This study analysed the comparative cost of feeding donor human milk to preterm infants compared to mother's own milk and formula.
Methods
A document and process analysis and a time measurement study were carried out at the milk bank of the Level 1 Perinatal Center of the University Hospital of Greifswald, Germany, from April to June 2017. The cost analysis data were provided by the University's financial department.
Results
The total cost per year was €92 085.02 for 300 litres of donor human milk: 27% of this was material costs, 51% was personnel costs, and 22% was other overheads. The average cost per litre was €306.95, and staff time was 492 minutes per litre. The total marginal cost for each additional litre of donor human milk, formula or unpasteurised mother´s milk was €82.88, €10.28 and €38.42, respectively. Pasteurising a litre of donor milk cost €3.51.
Conclusion
Providing preterm infants with donor milk was much more expensive than using formula or mother's own milk, but the cost of pasteurisation was minimal.
Background: Demographic changes are leading to a rapid increase in the number and proportion of the elderly. This goes along with an increase of prevalence of age-associated illnesses, such as dementia. The prevalence of dementia is estimated to amount to 1.5 million in Germany. Up to three-quarter of the persons with dementia (PWD) were living in their own homes. In European countries, dementia is associated with substantial and increasing healthcare costs, which makes dementia one of the most expensive diseases in old age and a serious health care priority. Whereas analyses of total healthcare costs in dementia have been the focus of various cost-of-illness (COI) studies, so far little is known about several cost categories in detail. Firstly, detailed economic analyses of medication cost are currently still missing. Secondly, it is well known that dementia is under-diagnosed, but there is a lack of knowledge about the differences in resource utilization and its costs between dementia patients with and those without a formal dementia diagnosis. Finally, analyses that take the utilization and costs of professional formal and unpaid informal care as well as caregiver’s productivity losses into a consideration are currently missing. Objectives: (1) To determine medication cost, cost per drug and number of drugs taken and analyze their associated factors; to estimate the current price reduction of anti-dementia drugs due to implementation of low-priced generics. (2) To determine health care resource utilisation and costs of patients with a formal diagnosis and those without a formal diagnosis of dementia, and to analyse the association between having received a formal dementia diagnosis and health care costs (3) To determine the utilization and costs of formal and informal care for PwD, indirect costs because of productivity losses of caregivers and the associations between cost, socio-demographic and clinical variables. Methods: The present study is a cross-sectional analysis of health care resource utilization and health care cost of community-dwelling PWD in primary care. Analyses are based on primary data from the ongoing DelpHi-MV trial (Dementia: Life- and person-centered help in Mecklenburg-Western Pomerania, Germany), a population-based, cluster-randomized, controlled intervention trial in the primary care setting (Clinical Trials gov. Identifier: NCT01401582). Eligible patients (older than 70 years, living at home) were screened in participating general practitioner practices for dementia using the DemTect. The utilization of healthcare resources was assessed within the baseline assessment at practitioner’s homes. Costs were calculated from the perspective of the statutory health insurance or the social perspective. Factors associated with healthcare cost were evaluated using multiple regression models. Results: (1) Medication cost and cost per drug were higher and the number of taken drugs lower in advanced stages of cognitive impairment. Prescription of anti-dementia generics could decrease overall medication cost by 28%. Medication cost was associated with number of diagnoses, deficits in activities of daily living and age. Dementia severity was related to cost per drug and number of drugs taken. (2) Patients formally diagnosed with dementia were treated significantly more often by a neurologist, but less often by all other outpatient specialists, and received anti-dementia drugs and day care more often. Diagnosed patients underwent shorter and less frequent planned in-hospital treatments. Dementia diagnosis was significantly associated with higher costs of anti-dementia drug treatment, but significantly associated with less total medical care costs, which valuated to be € 5,123 compared, to € 5,565 for undiagnosed patients. (3) Formal care were utilized less (26.3%) than informal care (85.1%), resulting in a cost ratio of one to ten (1,646 €; 16,473 €, respectively). In total, 29% of caregivers were employed, and every seventh (14.3%) experienced productivity losses, which corresponded to 1,258 € annually. Whereas increasing deficits in daily living activities were associated with higher formal and higher informal costs, living alone was significantly associated with higher formal care costs and the employment of a caregiver was associated with lower informal care costs. Conclusion: (1) Medication cost increases with the number of diagnoses and growing deficits in activities of daily living and decreases with age. Severely cognitively impaired persons are treated with a small number of high-priced drugs, which could suggest inadequate medication of multimorbid persons. (2) There are no significant differences in total health care cost between diagnosed and undiagnosed patients. Dementia diagnosis is beneficial for receiving cost-intensive anti-dementia drug treatments, but is currently insufficient to ensure adequate non-medication treatment for community-dwelling patients. (3) Informal care contributes the most to total care costs. Living alone is a major cost driver for formal costs because of the lower availability of potential informal care. The availability of informal care is limited and productivity losses are increased when a caregiver is employed.
All-embracing human activities have transformed one-third to one-half of the Earth’s land surface. There is a strong correlation of human well-being with ecosystem function, including poverty alleviation programs as well as enhancements of the health sector. To assess and evaluate the progress and outcome of initiatives stringent periodic observation is necessary. The presented approach combines the strengths of remote sensing and GIS analysis with social research applications. The Bach Ma National Park as an area under investigation was designated as protected area in 1991 and extended in 2008. The national park is uninhabited, but in the surrounding buffer zones approximately 62000 to 79000 people live in rural areas and in mostly impoverished conditions. The comprehensive nature conservation efforts of the Vietnamese Government during the last two decades has led to growing forest coverage of both plantation and natural forests. Nevertheless, the decreasing biodiversity and ongoing illegal logging and hunting activities in the national park are seen as major threats to conservation initiatives in the future. The remote sensing component consists of an analysis of a time series of Landsat images with seven steps ranging from 1973 to 2010. The resulting land cover analysis had 13 different classes. The accuracy assessment revealed an overall accuracy ranging from 84 to 90%. The basis for the second monitoring component was the Landsat images. A total of 25 different landscape metrics on the landscape, class, and patch level were calculated by FRAGSTATS. The third monitoring component is itself divided into two parts. This part consists of a qualitative social research study with 26 expert interviews. The second part consists of 61 standardized questionnaires and an evaluation by SPSS. The assessment reveals a more or less stable forest cover, but with a considerable degradation process during the last four decades. Urban areas outside of the national park have increased in size considerably. For dense and medium forest patches an increasing fragmentation and isolation of patches was observed. Patches of natural forests and habitats of thousands of species have declined dramatically, a trend that is related to a decreasing core area characterised by its undisturbed conditions. The Landsat images and landscape metrics reveal the major differences between the national park and surrounding areas. Despite extensive alterations near the border, remaining forest patches in the national park are still bigger and less fragmented. Nevertheless, the third monitoring component revealed undiscovered changes in the forest beyond the possibilities of used images and metrics. It includes illegal logging and hunting activities. Non-timber forest products are similar to faunistic species collected for both the subsistence of the local residents and associated markets as important sources of income. Based on this bisection, local residents as well as certain strangers are responsible for the activities in the forest. The plan of national park management is to intensify existing monitoring and patrolling in the forest to limit the exploitation and impact in relevant zones. Furthermore, the importance of a network of protected areas has attracted increasing attention. The assessment of the questionnaires reveals that deforestation and also reforestation were the key aspects of historical land cover change. Additionally, for the local residents the conversion of forests into arable land as income alternative is of major importance. Capacity development is not only one priority of the Bach Ma management but also of the international community for all of Vietnam. The tourism industry, one of the most promising opportunities of recent years, stands to support both national park management as well as the local residents. For local residents the extraction of non-timber forest products is an essential portion of the income. The current pilot policy 126/QD-TTg in the extension zone of the national park and research on an appropriate sharing mechanism is of the utmost importance. The established and presented monitoring components are cost-effective and can be used to regularly assess the land cover change of a protected area. They can be implemented together or individually into existing monitoring schemes. A smart combination of pre-existing datasets is necessary to overcome the inconsequential amount of money for monitoring procedures. Supplemented by socio-economic monitoring and the demands as well as impacts of human activity need to be integrated. These extensive requirements for prospective monitoring are only feasible with comprehensive and reliable collaborations.
District hospitals are the only solution to guarantee basic health care including life-saving surgeries and hospitalisations in rural SSA areas. Neither regional nor national hospitals, financially and geographically out of reach for the majority of the population, nor rural health care centres, mostly staffed with a nurse only, can cover these tasks adequately. However, only little research exists on care giving processes, cost and efficiency of district hospitals in SSA. The general problem in health economics is that limited resources should be used in order to maximise health effects. This dissertation evaluates the actual treatment pathways and their average provider’s cost per patient for four different diagnoses at Nouna district hospital in Burkina Faso. A total of 95 patient records was analysed in detail and discussed with the health personnel in charge. Cost information for the year 2005 was taken from the well-established provider cost information system. Cost were broken down to the different sequences of the treatment pathway and summed up at the end. Average provider’s cost for paediatric Malaria were U$ 6.71 for outpatients, US$ 60.59 for inpatients with anaemia and US$ 75.11 for inpatients with neurological affection. Average provider’s cost for treating hypertension were US$ 67.94 per year. Average cost for hernia cure were US$ 146.85 under local anaesthesia, US$ 153.08 under spinal anaesthesia and US$ 169.78 under general anaesthesia. Average provider’s cost for Caesarean sections were US$ 140.15 under spinal anaesthesia and US$ 180.41 under general anaesthesia. This means that cost per patient are comparable to or even lower than provider’s cost found for other SSA setting in the literature. Cost would decrease between 20% (a hypertensive outpatient) and 46% for Malaria with neurological affection as complication, if utilisation rates rose from actually 20 to 80%. Patients paid between 35 and 94% of total provider’s cost in form of user fees. If fees would not change and the utilisation rate increased to 80%, cost-recovery for the considered diseases would then be between 63 and 117%. Although this would not allow the hospital to break even in its current configuration, the cost-recovery rate would be considerably higher, especially when taking into account that a full cost analysis was done including all investment cost. The introduction of clinical pathways based on the actual treatment pathways is suggested to improve process structure and documentation and to standardise the treatment according to national and international guidelines.
Mutualisms are ubiquitous in nature and shape whole ecosystems. Although species benefit by interacting with each other, they permanently act selfishly. As a consequence, the involved partners must balance gaining the maximal benefit while accepting a certain amount of costs. Changes in the environment, however, may alter selection pressures and lead to a shift in the relative costs and benefits for both involved species. Due to this complexity, many mutualisms and their underlying processes, such as the dependence of the involved species on each other, are only poorly understood. Moreover, in several so-called mutualistic interactions it is unclear if they are in fact beneficial for all partners because detailed cost-benefit analyses are missing. The aim of my thesis was to contribute to a better understanding of the basic principles of mammal-plant mutualisms with special emphasis on the interdependence of the involved species. Using the interaction between an insectivorous bat species (Kerivoula hardwickii) and carnivorous pitcher plants (genus Nepenthes) as a model system, I conducted a detailed cost-benefit analysis to test if the partners interact mutualistically and are strongly dependent on one another. I hypothesised that pitchers of these plants serve as high quality roosts for the bats while the bats in turn fertilise the plants via their nutritious faeces. For the involved species the costs of the interaction should be lower than the gained benefits, but general costs should increase in the absence of the partner. Over the course of my field research, I found the bats roosting in three Nepenthes species, but the bats occupied intact pitchers of only one species, Nepenthes hemsleyana. In Nepenthes bicalcarata and Nepenthes ampullaria, the bats used senescing or damaged pitchers whose high amount of digestive fluid had drained off. Thus, only N. hemsleyana was potentially able to digest bat faecal matter, and thereby benefit from the bats. My cost-benefit analysis showed that N. hemsleyana plants strongly benefited from their bat interaction partner: In feeding experiments the plants gained between 34% and 95% of their nitrogen from bat faeces, which significantly improved their growth, photosynthesis and survival. In contrast, plants without access to faeces could not fully compensate the induced lack of nutrients by using arthropod prey. Field observations revealed no obvious costs for the pitcher plant. N. hemsleyana pitchers occupied by bats did not differ in their lifespan from unoccupied ones as bats did not injure the plants’ tissue. The interaction was also advantageous for K. hardwickii because N. hemsleyana offered high quality roosts with a favourable microclimate and low parasite infestation risk. Consequently, bats roosting in N. hemsleyana pitchers were in better condition than those roosting in dead N. bicalcarata pitchers. Although N. hemsleyana pitchers are rare in the natural habitat, bats could easily find and identify them due to an echo reflector, which reduces time and energy costs for roost detection. Most N. hemsleyana plants continuously provided at least one intact pitcher meaning bats could return to the same plants over a period of several months or even years. The interaction between K. hardwickii and N. hemsleyana can be classified as an asymmetric facultative mutualism with stronger dependence of the plant partner. N. hemsleyana has outsourced arthropod capture and digestion to its mutualistic bat partner while arthropod attraction is strongly reduced. Contrastingly, several populations of K. hardwickii frequently use alternative roosts. Strong selective pressure on the plants could be the consequence to attract bats with a potential stabilising effect on the interaction: N. hemsleyana has to outcompete the involuntarily offered roosts of the other Nepenthes species in terms of quality and accessibility. My thesis revealed complex interdependencies in an animal-plant mutualism. This study exemplifies that rigorous cost-benefit analyses are crucial for the classification of interspecific interactions and the characterisation of how the involved species affect and depend on each other.
Costs of reproduction. A demographical approach to examine life-history trade-offs ─ Abstract. Resource-allocation trade-offs are fundamental constraints of life-history evolution. In particular the trade-offs between reproduction and longevity and between present and future reproduction are expected to form reproductive patterns. Unfortunately, exploring such trade-offs in natural populations is complicated and may not be possible. In face of several limitations, zoo data appear to be useful to better understand the reproductive biology of endangered, rare or cryptic species. In the first step, it was sought after with a data-mining, comparative multi-species approach for broad patterns of correlations between lifespan and variables in bird-eating spiders (Theraphosidae). The subfamily Eumenophoriinae on average lived longest, followed by the Theraphosinae, Ornithoctinae, Grammostolinae, Selenocosmiinae, Ischnocolinae and finally the Avicularinae. Species inhabiting tropical, more humid and/or low-altitude environments lived longer, suggesting that more predictable environments favour the evolution of longer lifespans. Furthermore, large range size, low abundance, sub-terrestrial life-style, and aggressive behaviour were all linked with longer lifespans. An argument for resource allocation trade-offs was found as larger spiderling and prosoma size were negatively related to longevity. In the second step, a demographical approach has been applied for two old-world deer species (Vietnamese sika deer Cervus nippon pseudaxis, Mesopotamian fallow deer Dama dama mesopotamica). In both species, births peaked right before the onset of the rainy season in natural environments. Females reached high reproductive output earlier in life and had (in one species only) higher survival rates than males. Offspring number covaried positively rather than negatively with longevity. In females, the length of the reproductive phase correlated positively with longevity, birth rate within the entire lifespan, and offspring number, while it was negatively correlated to the birth rate during the reproductive phase (in one species). The length of the post-reproductive phase was positively related to longevity and negatively to birth rate during the entire lifespan. In the third section, life-histories of Asiatic (Equus hemionus ssp.) and African wild asses (Equus africanus ssp.) have been anlaysed in a comparative way with another demographical long-term approach. All taxa showed even in captivity peak birth rates during the periods of highest food availability in their natural environments. Sex-specific survival rates with females living longer than males were evident in Kulan and Onager but not in Kiang and Somali wild ass, pointing towards different life-history strategies even among closely related taxa. Females achieved their highest reproductive output earlier than males, which is typical for polygynous mating systems. Offspring number and longevity were rather positively correlated than negatively. Taken together evidence for reproductive trade-offs was weak, though the length of the reproductive period was negatively related to birth rates within the reproductive period. Birth intervals increased with female age, probably reflecting detrimental effects of senescence.
Course of disease and risk factors for hospitalization in outpatients with a SARS-CoV-2 infection
(2022)
We analyzed symptoms and comorbidities as predictors of hospitalization in 710 outpatients in North-East Germany with PCR-confirmed SARS-CoV-2 infection. During the first 3 days of infection, commonly reported symptoms were fatigue (71.8%), arthralgia/myalgia (56.8%), headache (55.1%), and dry cough (51.8%). Loss of smell (anosmia), loss of taste (ageusia), dyspnea, and productive cough were reported with an onset of 4 days. Anosmia or ageusia were reported by only 18% of the participants at day one, but up to 49% between days 7 and 9. Not all participants who reported ageusia also reported anosmia. Individuals suffering from ageusia without anosmia were at highest risk of hospitalization (OR 6.8, 95% CI 2.5–18.1). They also experienced more commonly dyspnea and nausea (OR of 3.0, 2.9, respectively) suggesting pathophysiological connections between these symptoms. Other symptoms significantly associated with increased risk of hospitalization were dyspnea, vomiting, and fever. Among basic parameters and comorbidities, age > 60 years, COPD, prior stroke, diabetes, kidney and cardiac diseases were also associated with increased risk of hospitalization. In conclusion, due to the delayed onset, ageusia and anosmia may be of limited use in differential diagnosis of SARS-CoV-2. However, differentiation between ageusia and anosmia may be useful for evaluating risk for hospitalization.
Background and objective
The COVID-19 pandemic started in Wuhan, China, in December 2019. Although there are some doubts about the reporting of cases and deaths in China, it seems that this country was able to control the epidemic more effectively than many other countries. In this paper, we would like to analyze the measures taken in China and compare them with other countries in order to find out what they can learn from China.
Methods
We develop a system dynamics model of the COVID-19 pandemic in Wuhan. Based on a number of simulations we analyze the impact of changing parameters, such as contact rates, on the development of a second wave.
Results
Although China’s health care system seems to be poorly financed and inefficient, the epidemic was brought under control in a comparably short period of time and no second wave was experienced in Wuhan until today. The measures to contain the epidemic do not differ from what was implemented in other countries, but China applied them very early and rigorously. For instance, the consequent implementation of health codes and contact-tracking technology contributed to contain the disease and effectively prevented the second and third waves.
Conclusions
China’s success in fighting COVID-19 is based on a very strict implementation of a set of measures, including digital management. While other countries discuss relaxing the lock-down at a rate of 50 per 100,000 inhabitants, China started local lock-downs at a rate of 1.59 per 100,000. We call for a public debate whether this policy would be feasible for more liberal countries as well.
COVID-19 Vaccinated Individuals Can Be a Source of SARS-CoV-2 Transmission—A Systematic Review
(2021)
Fundamental rights are probably given back earlier to COVID-19 vaccinated individuals
assuming that they cannot spread SARS-CoV-2 anymore. The objective of the study was to determine
if COVID-19 vaccinated individuals can still be the source of SARS-CoV-2 transmission. PubMed
was searched for studies on 4 April 2021. All studies with original data on COVID-19 cases among
vaccinated individuals (phase III RCTs) and on viral load in the upper respiratory tract of vaccinated
macaques after a SARS-CoV-2 challenge were included. Symptomatic COVID-19 cases were found
in four trials among vaccinated participants although less frequently than among control subjects.
One study revealed asymptomatic COVID-19 cases in a similar frequency among 2.168 AZD1222-
vaccinated subjects (1.0%) compared to 2.223 control subjects (1.0%). In 15 studies with vaccinated
macaques, it was found that the load of SARS-CoV-2 RNA, subgenomic RNA and infectious virus
in the upper respiratory tract is variable. Sterilizing immunity was found in none of the animal
studies. Major limitations of the animal studies are that the SARS-CoV-2 challenge took place within
a few weeks of the final or only vaccine dose, that the viral challenge was often high and, in some
studies, administered by up to four routes. Based on current knowledge it seems clear that COVID-19
vaccinated individuals can still be the source of SARS-CoV-2 transmission.
Background
Over the course of the COVID-19 pandemic, previous studies have shown that the physical as well as the mental health of children and adolescents significantly deteriorated. Future anxiety caused by the COVID-19 pandemic and its associations with quality of life has not previously been examined in school children.
Methods
As part of a cross-sectional web-based survey at schools in Mecklenburg-Western Pomerania, Germany, two years after the outbreak of the pandemic, school children were asked about COVID-19-related future anxiety using the German epidemic-related Dark Future Scale for children (eDFS-K). Health-related quality of life (HRQoL) was assessed using the self-reported KIDSCREEN-10. The eDFS-K was psychometrically analyzed (internal consistency and confirmatory factor analysis) and thereafter examined as a predictor of HRQoL in a general linear regression model.
Results
A total of N = 840 8–18-year-old children and adolescents were included in the analysis. The eDFS-K demonstrated adequate internal consistency reliability (Cronbach's α = 0.77), and the confirmatory factor analysis further supported the one-factor structure of the four-item scale with an acceptable model fit. Over 43% of students were found to have low HRQoL. In addition, 47% of the students sometimes to often reported COVID-19-related fears about the future. Children with COVID-19-related future anxiety had significantly lower HRQoL (B = – 0.94, p < 0.001). Other predictors of lower HRQoL were older age (B = – 0.63, p < 0.001), and female (B = – 3.12, p < 0.001) and diverse (B = – 6.82, p < 0.001) gender.
Conclusion
Two years after the outbreak of the pandemic, school-aged children continue to exhibit low HRQoL, which is further exacerbated in the presence of COVID-19-related future anxiety. Intervention programs with an increased focus on mental health also addressing future anxiety should be provided.
Extracts from the leaves and flowers of Crataegus spp. (i.e., hawthorn species) have been traditionally used with documented preclinical and clinical activities in cardiovascular medicine. Based on reported positive effects on heart muscle after ischemic injury and the overall cardioprotective profile, the present study addressed potential contributions of Crataegus extracts to cardiopoietic differentiation from stem cells. The quantified Crataegus extract WS®1442 stimulated cardiomyogenesis from murine and human embryonic stem cells (ESCs). Mechanistically, this effect was found to be induced by promoting differentiation of cardiovascular progenitor cell populations but not by proliferation. Bioassay-guided fractionation, phytochemical and analytical profiling suggested high-molecular weight ingredients as the active principle with at least part of the activity due to oligomeric procyanidines (OPCs) with a degree of polymerization between 3 and 6 (DP3–6). Transcriptome profiling in mESCs suggested two main, plausible mechanisms: These were early, stress-associated cellular events along with the modulation of distinct developmental pathways, including the upregulation of brain-derived neurotrophic factor (BDNF) and retinoic acid as well as the inhibition of transforming growth factor β/bone morphogenetic protein (TGFβ/BMP) and fibroblast growth factor (FGF) signaling. In addition, WS®1442 stimulated angiogenesis ex vivo in Sca-1+ progenitor cells from adult mice hearts. These in vitro data provide evidence for a differentiation promoting activity of WS®1442 on distinct cardiovascular stem/progenitor cells that could be valuable for therapeutic heart regeneration after myocardial infarction. However, the in vivo relevance of this new pharmacological activity of Crataegus spp. remains to be investigated and active ingredients from bioactive fractions will have to be further characterized.
Abstract
Climate change will lead to more frequent and severe drought periods which massively reduce crop production worldwide. Besides drought, nitrogen (N)‐deficiency is another critical threat to crop yield production. Drought and N‐deficiency both decrease photosynthesis and induce similar adaptive strategies such as longer roots, reduction of biomass, induction of reactive oxygen species (ROS), and antioxidative enzymes. Due to the overlapping response to N‐deficiency and drought, understanding the physiological and molecular mechanisms involved in cross‐stresses tolerance is crucial for breeding strategies and achieving multiple stress resistance and eventually more sustainable agriculture. The objective of this study was to investigate the effect of a mild N‐deficiency on drought stress tolerance of tomato plants (Solanum lycopersicum L., cv. Moneymaker). Various morphological and physiological parameters such as dry biomass, root length, water potential, SPAD values, stomatal conductance, and compatible solutes accumulation (proline and sugar) were analyzed. Moreover, the expression of ROS scavenging marker genes, cytosolic ASCORBATE PEROXIDASES (cAPX1, cAPX2, and cAPX3), were investigated. Our results showed that a former mild N‐deficiency (2 mM NO3−) enhances plant adaptive response to drought stress (4 days) when compared to the plants treated with adequate N (5 mM NO3−). The improved adaptive response was reflected in higher aboveground biomass, longer root, increased specific leaf weight, enhanced stomatal conductance (without reducing water content), and higher leaf sugar content. Moreover, the APX1 gene showed a higher expression level compared to control under N‐deficiency and in combination with drought in the leaf, after a one‐week recovery period. Our finding highlights a potentially positive link between a former mild N‐deficiency and subsequent drought stress response in tomato. Combining the morphological and physiological response with underlying gene regulatory networks under consecutive stress, provide a powerful tool for improving multiple stress resistance in tomato which can be further transferred to other economically important crops.
Abstract
Spiders of the genus Micaria are ground‐living mimics of ants. Species delineation in these spiders is challenging, mainly because of exceptional high levels of intraspecific variation masking species boundaries. As implied by preliminary DNA barcode data from Central Europe, the Holarctic and very widely distributed glossy ant‐spider M. pulicaria shows cryptic diversity. Here, we disentangle the hidden diversity by means of an integrative taxonomy approach, using mitochondrial DNA, morphometrics, traditional genitalic characters and ecology. Our data suggest the clear delineation of two distinct species, which supports the conception of 19th century taxonomists. These early naturalists distinguished M. pulicaria and a second closely related species based on morphology and natural history, which were synonymized in subsequent taxonomic studies. Therefore, we re‐circumscribe M. pulicaria and revalidate the long forgotten M. micans. These two Micaria species co‐occur sympatrically in vast areas of the western Palearctic, while the Nearctic region is populated by M. pulicaria alone. Male genitalic traits are more dissimilar in the area of sympatry than in allopatry, suggesting a decisive role of reproductive character displacement in species diversification. Our study emphasizes the value of the early taxonomic literature in integrative taxonomic studies, as it may contain crucial information on natural history that are not regularly recorded by modern taxonomists.
Abstract
The spectral properties of three-dimensional dust clusters confined in gaseous discharges are investigated using both a fluid mode description and the normal mode analysis (NMA). The modes are analysed for crystalline clusters as well as for laser-heated fluid-like clusters. It is shown that even for clusters with low particle numbers and under presence of damping fluid modes can be identified. Laser-heating leads to the excitation of several, mainly transverse, modes. The mode frequencies are found to be nearly independent of the coupling parameter and support the predictions of the underlying theory. The NMA and the fluid mode spectra demonstrate that the wakefield attraction is present for the experimentally observed Yukawa balls at low pressure. Both methods complement each other, since NMA is more suitable for crystalline clusters, whereas the fluid modes allow to explore even fluid-like dust clouds.
Abstract
The known Schiff base compound, (E)1‐benzyl‐3‐((4‐methoxyphenyl)imino)‐5‐methylindolin‐2‐one, was prepared as before by reacting 1‐benzyl‐5‐methylindoline‐2,3‐dione with 4‐methoxyaniline. The product was unambiguously characterized using elemental analysis, 1H and 13C‐NMR spectroscopy, and its new single‐crystal X‐ray structural analysis. Molecular orbital calculations were conducted in order to investigate the structures and relative stabilities of the (E) and (Z) isomers of 1‐benzyl‐3‐([4 methoxyphenyl]‐imino)‐5‐methylindolin‐2‐one. Specific attention was paid to the (E) isomer. The available crystallographic experimental data for the latter ensured also validation of the model structures computationally derived at the theoretical B3LYP/6‐31G(d,p) level.
The aims of this study were to quantify the key mineralization processes and the resulting nutrient release potentials of different sediment types, their ranges of extent and dependency on varying environmental conditions such as seasonal variations or shifts in oxygen availability. Benthic phosphate fluxes and flux potentials were of particular interest as P is an essential nutrient for algal growth in marine systems and phosphate is often limiting primary production, hence strongly promotes the production of new biomass. A major P source in marine environments are mineralization products of early diagenetic processes.
To gain insight into the pathways of organic matter mineralization and subsequent secondary reactions, key reactants in the solid and the dissolved phase were considered in typical sediments of the Baltic Sea and the Black Sea. Seven study sites in the German Baltic Sea region, representative of the major depositional environments, including coarse and fine grained sediments, both rich or poor in organic carbon, were intensively studied. The investigations were conducted on a seasonal basis during ten ship-based expeditions between July 2013 and March 2016, covering spring- and autumn algal blooms, stagnation periods with bottom water hypoxia and winter dormancy. Hypoxic conditions frequently developed in the bottom waters of the Bay of Mecklenburg, Stoltera and the Arkona Basin sites, shallower stations like the Tromper Wiek, the Oder Bank and the Darss Sill were usually not affected by hypoxia. Increased nutrient concentrations in the bottom waters coincided with oxygen depletion. High salinity dynamics were observed in the bottom waters above the studied sediments, which were due to frequent salt water inflows from the North Sea. Bottom water temperature variability was seasonally conditioned.
The studied sands showed 2-3 orders of magnitude higher permeability values and about one order of magnitude lower organic matter contents compared to the studied muds. Occasionally, strongly increased organic matter contents were observed in the sands, likely induced by downward mixing of plankton bloom derived particles. The organic matter was found to be essentially supplied by marine phytoplankton, indicated by its elemental composition and isotopic signature.
Additionally, an adapted approach of the Keeling plot method was made to characterize the source material of organic matter mineralization. In marine environments, dissolved inorganic carbon concentrations often increase with depth together with an isotopic carbon signature shift to lighter values due to organic matter mineralization. The Keeling plot method was commonly used to determine the isotopic signature of carbon sources for ecosystem respiration. Conventionally, the influence of respiratory depletion of 13CO2 on the isotopic composition of the atmosphere was studied in terrestrial and limnic biogeochemistry. The same approach was applied on organic matter mineralization in sediments and the water column during this study. Mixing of bottom water derived background DIC and DIC released into the environment during organic carbon decomposition was assumed. In a modification of previous approaches, where changes in concentration and δ13C of DIC were followed over time, vertical profiles were analyzed in this study, which represent time-dependent variations superimposed by transport processes . DI13C gradients in the water column of the Black Sea and pore water profiles in the Black Sea and the Baltic Sea were used to estimate the 13C signature of the mineralized organic carbon via Keeling plot analysis. The Black Sea water column revealed a δ13C signature of the organic matter source close to the signature of typical particulate organic matter in the ocean and previously reported values for the Black Sea euphotic zone. In the pore waters of Black Sea sediments (from short and long sediment cores), Keeling plot analysis clearly demonstrates that the released DIC at depth can be derived from different sources. An isotopically very light carbon source (< –60 ‰) was associated with anaerobic oxidation of methane in the Black Sea. Marine organic matter was the principal source for DIC in the deeps of Baltic Sea basins, while the calculated carbon source isotopic signature in sediments of sand flats and bays was shifted to heavier δ13C signatures compared to marine organic matter. These shifts were attributed to potential dissolution of sedimentary carbonates or organic inputs of terrestrial C4 vascular plants like maize and other agricultural plants. The carbon source isotopic composition calculated via Keeling plot analysis correlated well with directly measured δ13C signatures of surface sediments POM.
Organic matter mineralization activity in the southern Baltic Sea sediments was studied via gross sulfate reduction rate analysis and total oxygen uptake measurements in sands and muds. Oxygen penetration depths were less than 4 mm in both, muddy and sandy sediments. Oxygen uptake rates were similar in muds (10.2 mmol m–2 d–1) and sands (10.7 mmol m–2 d–1), while significantly higher rates were measured in the coastal near sites of the Bay of Mecklenburg (about 12 mmol m–2 d–1) than in the deeper Arkona Basin (about 9 mmol m–2 d–1). Substantial sulfate reduction was measured in the muddy (about 4 mmol m–2 d–1) and the sandy (about 1 mmol m–2 d–1) study sites. Highest sulfate reduction rates (4.4 – 5 mmol m–2 d–1) were detected in the muds of the Bay of Mecklenburg during summer, about twice as high as in the Arkona Basin muds. Increased mineralization activity of the coastal near muds of the Bay of Mecklenburg is attributed to enhanced input of fresh organic matter during algal blooms.
About twofold higher oxygen consumption and sulfate reduction rates were measured in summer compared to winter in sandy and muddy sediments.
The studied sites were usually characterized by a typical biogeochemical zonation with oxic, suboxic and sulfidic zones. The concentration profiles in the muds reflected sulfate reduction and secondary redox-reactions, liberating dissolved carbon, nitrogen, phosphorus and hydrogen sulfide into the interstitial waters. Orders of magnitude lower concentrations were detected in the sands, while their top centimeters were mostly irrigated and mineralization products only accumulated below.
A several centimeter thick suboxic zone was sustained by active downward transport of oxidized material in the southern Baltic Sea coastal sediments, presumably mainly through bioturbation. Especially sulfur and iron species were involved in the secondary reactions between the metabolites of early diagenetic processes occurring in the suboxic zone. Partly high temporal variability was observed in the form of vertical migration of the sulfidic zone and a corresponding expansion and shrinking of the suboxic zone. The Arkona Basin site showed the most stable geochemical zonation over time, while the Luebeck Bight site and especially the Mecklenburg Bight site showed striking dynamics. The consequent redox-regime shifts within the surface sediments might promote mineralization of organic matter as higher sulfate reduction rates and higher total oxygen uptake were measured in these more dynamic muds. The vertical shifts of the redox-gradients can largely be explained by temporal and spatial variability of bioturbation activity, but also anthropogenic activities may play a role. Bottom trawling, may be the dominant mixing process at the Mecklenburg Bight site.
In the sands, less reactive iron and manganese contents were available compared to the studied muds, which may be due to frequent irrigation of the top centimeters leading to a loss of pore water reservoirs like dissolved Fe and Mn.
Another mixing process, storm induced sediment resuspension, was suggested to be important for the sediments in the study area. A severe sediment resuspension event at the silty Tromper Wiek site was indicated by steep gradients in pore water concentration and particulate mater content profiles in the top ∼ 5 cm sediments. Carrying out non steady state modeling (Bo Liu, IOW), the successive re-development of the pore water profiles towards a steady-state was simulated and the time span necessary to establish measured pore water profiles after the sediment disturbance event was approximated. In the predicted time span, daily average wind speeds reached an annual high of the category ‘gale’ which was probably sufficient to resuspend and irrigate the surface silt-type sediments.
This study showed that sediment mixing processes have a strong influence on early diagenetic reactions, solute release potentials and actual fluxes from the sediments. Also the sediment mixing via bottom trawl fishing can be regarded as an event-like disturbance. The newly developed approach of non-steady-state modeling of pore water sets (Bo Liu; IOW) can help to answer the question, how long it takes to reach a steady-state after a sediment disturbance event.
The concentration profiles in interstitial waters were used to calculate net transformation rates via the transport-reaction models REC and PROFILE. The calculations revealed net release of H4SiO4 and PO4 within the top 20 cm of the studied muds, while net DIC and NH+4 consumption and sulfate production was clearly evident within the top ∼ 5 cm. Intensive reoxidation of sulfide that was produced via sulfate reduction was also indicated by large deviations between the modeled net sulfate transformation rates and experimentally derived gross sulfate reduction rates. These surface near transformations were probably associated with microbial chemosynthesis.
The studied sands of the southern Baltic Sea were usually characterized by very low pore water gradients, probably due to their frequent irrigation. Accordingly, calculated transformation rates were one to two orders of magnitude lower in the studied sands compared to the muds of the southern Baltic Sea. However, during a situation with a stratified water column, substantial pore water reservoirs with the typical concentration trends were present in the sandy Darss Sill sediments. Integrated production rates of PO4, Mn2+ and H4SiO4 derived from these concentration profiles were in the same order of magnitude as in the muddy Arkona Basin.
Intensive pore water irrigation is also capable to transport fresh organic matter into the sediment as was occasionally indicated by strongly increased surface near TOC in the sands. Considerable gross sulfate reduction rates and total oxygen uptake rates were measured in the sandy Oder Bank sediments, where pore water concentration profiles rather suggested absence of diagenetic processes. The studied sands were, hence, not unreactive substrates but usually rather unable to preserve the mineralization products.
This reflects the often limited significance of pore water evaluations in irrigated sandy sites but also the high mineralization potentials of coastal sands. Early diagenetic processes and the impact of intense benthic-pelagic exchange in such shallow marine environments is still poorly understood, as they were rarely investigated in the past and are methodologically more difficult to investigate.
The Baltic Sea deeps Gotland Deep and Landsort Deep were mainly controlled by sulfate reduction and shallow anaerobic oxidation of methane. Calculated rates of net sulfate reduction and net sulfide production were equivalent, indicating a lack of sulfide re-oxidation reactions. Phosphate liberation rates were low in the surface sediments, but strong linear concentration gradients indicated liberation at depth.
The euxinic Black Sea sediments were purely controlled by sulfate reduction via anaerobic oxidation of methane at the sulfate-methane transition zone in sediment depths of up to several meters. Subsequent diffusive concentration gradients clearly dominated pore water profiles in the surface sediments.
Benthic solute reservoirs of the top 10 cm pore waters were generally higher in the muds than in the sands of the southern Baltic Sea. The smaller reservoirs in the sands were cause by intensive exchange between pore water and bottom water in these permeable sediments. The three studied muddy sites of the southern Baltic Sea showed great dissimilarities with respect to their pore water compositions. Large observed pools of dissolved Fe2+ and PO4 clearly point to reduction of reactive Fe and release of adsorbed P pools. Multi-dimensional scaling analysis showed that seasonal variability played only a minor role for the observed variability of the benthic solute reservoirs. Principal component analysis revealed that the studied sediments can be characterized by essentially two factors based on their pore water reservoirs of the top 10 cm: 1) their mineralization and accumulation efficiency and 2) their secondary reactions in the suboxic zone, reflecting fundamental differences in their sedimentation conditions and mixing processes. While the sands were similar to each other due to their overall low reservoirs, sands, silts and muds mainly differed in their mineralization and accumulation efficiency. Large variability was also observed within the studied muds regarding their predominating redox metabolites. Highest dissimilarities were evident between the neighboring sites Mecklenburg Bight (mostly suboxic) and Luebeck Bight (mostly sulfidic). Therefore, the biogeochemical state in the studied sediments were shown to be mainly controlled by their sediment type and the transport of reactive iron into the sediments. The supply of organic matter to the sea floor controlled the overall mineralization activity, while the sediment permeability determined the accumulation efficiency of the sediment. Mixing of surface sediments together with the complex relation of oxygen, sulfur, iron and phosphorus in the solid and aqueous phase is controlling benthic nutrient fixation/liberation reactions. Salinity variability showed no noticeable effects on early diagenetic processes. During four sampling occasions in the Arkona Basin, bottom water salinity showed strong variability which was also effecting pore water concentration profiles in more than 15 cm depth. However, concentration profiles of typical organic matter mineralization products remained remarkably stable. Also gross sulfate reduction rates seemed to be unaffected by the variable pore water sulfate concentrations.
Nutrient fluxes across the sediment-water interface were obtained by the interpretation of vertical pore water concentration profiles via different models (diffusive fluxes) and via incubation of intact sediment cores (total fluxes). Benthic diffusive fluxes represent potential release of solutes into the water column. They were often strongly associated with the benthic reservoirs, thus fluxes were highest in the muds, considerably lower in the organic-poorer silts, and generally close to zero in the sands. The dissimilarities between diffusive fluxes in the different sediments were mainly controlled by the sediment type. Highest variability was observed within the muds, controlled by their different diagenetic pathways due to different sediment mixing intensities.
In the muddy sediments, diffusive PO4 fluxes were much higher than mineralization of organic matter with the common element ratios of marine organic matter can provide, indicating active recycling of phosphorus within the muds due to recurring adsorption and re-release on reactive iron oxyhydroxide phases. Especially in the strongly mixed Mecklenburg Bight sediments, pore water dissolved PO4 was primarily controlled by the release of adsorbed P. Actual PO4 release into the bottom waters (determined via core incubation experiments) was only measured under extended bottom water oxygen deficiency conditions. The same applied to the redox-sensitive solutes Fe2+, Mn2+ and sulfide.
For the less redox-sensitive solutes, diffusion usually accounted only for a fraction of the total interfacial flux. The proportion of advective to diffusive transport was estimated with different methods. Bioturbation induced sediment mixing was quantified by comparing the diffusive H4SiO4 fluxes derived from pore water modeling with the total fluxes derived from the core incubations. The studied muds showed infauna induced advection proportions of about 35 – 100 %. Only when infauna was absent, diffusion became the dominant transport process across the sediment-water interface. In the studied sands, advection was the dominating transport process, since their generally low surface near reservoirs lead to diffusive fluxes close to zero. However, it remains unclear whether bioturbation or hydrodynamic irrigation are responsible for that. An attempt was made to estimate the effect of hydrodynamic irrigation for a range of reasonable bottom water velocities from the sediment bedform geometry after Neumann et al. (2017). However, resulting potential hydrodynamic irrigation was found to be rather low compared to reported values from the literature and may significantly underestimate actual irrigation of the sandy sediments.
In a new non steady-state multi-element diagenetic modeling approach (Bo Liu, IOW), vertical δ13C pore water profiles were used to estimate the significance of advective transport processes. Mixing processes at the sediment-water interface were expressed as multiple of pure diffusion (ε). By adjusting this mixing coefficient as boundary condition for best fits of predicted to measured pore water profiles, the degree of these mixing processes was estimated. In the Arkona Basin surface sediments, this approach revealed best fits assuming a mixing depth of 3.5 cm with a tenfold higher total mixing degree based on diffusional transport. The calculated mixing depths and intensities were similar to bioturbation depths and rates obtained via traditional methods (Morys, 2016). The novel modeling approach is a promising method to evaluate surface sediment mixing processes.
Increased mineralization activity during productive seasons lead to increased oxygen consumption and therefore frequent bottom water hypoxia. The effects of hypoxic bottom water conditions on the early diagenetic processes in the sediments were studied via prolonged core incubation experiments. Shifts to bottom water oxygen deficiency had various consequences for benthic reservoirs and fluxes. The oxygen consumption decreased during hypoxic incubation phases. Decreased bioturbation activity diminished advective transport so that total fluxes of redox-insensitive solutes (e.g. H4SiO4) were decreased. Reactive iron and manganese oxides act as barrier (“iron curtain”) in the suboxic zone, preventing redox-sensitive solutes from their release into the water column. After a shift to bottom water hypoxia, these reactive oxides are re-dissolved and liberated into the water column. Prolonged incubation experiments suggested that the Mn-oxide reservoirs were depleted first before the Fe-oxides with the adsorptively bound phosphate were liberated.
The release of nutrients (especially phosphorus), dissolved inorganic carbon, and redox- sensitive compounds (e.g. hydrogen sulfide) strongly varied in the different studied environments, covering coastal-near oxic, temporary hypoxic and euxinic conditions.
In environments, where advection through hydrodynamic irrigation or bioturbation do not occur, like in anoxic or euxinic systems, surface-near pore water gradients reflect total solute interfacial fluxes. They depend on the supply of organic matter to the sea floor, the mineralization rates in the sediments and the composition of the overlying bottom water. In the Black Sea, much of the organic matter mineralization was performed already in the water column and not in the sediments, leading to a decreasing export of organic matter to the sediment and increasing concentrations of mineralization products in the bottom water with increasing water depth. Accordingly, benthic fluxes across the sediment-water interface of the deep Black Sea sites were the lowest of the entire study, essentially reflecting the low mineralization rates of AOM in deeper layers. Highest fluxes in the Black Sea were observed at the continental slope at intermediate water depths, but were still lower than in the Baltic Sea deeps.
In contrast, highest DIC fluxes were detected in the oxygen depleted Baltic Sea deeps Gotland Deep and Landsort Deep. These basins are shallow enough that reactive organic matter reaches the sea floor, where it is mineralized via sulfate reduction close to the sediment surface. Strong concentration gradients and therefore high diffusive interfacial fluxes across the sediment-water interface were evident. As bioturbation was absent, these diffusive fluxes were representative for total interfacial fluxes unlike in sediments with additional advective flux components.
In more complex environments, like coastal oxic sediments, inhabited by macrofauna, overflowed by currents and affected by resuspension events, the sediment surface represents an interface between turbulent and calm conditions, high and low concentrations and/or different redox-states. Such gradients are the basis for intensive exchange processes. The surface sediments in the coastal sites of the southern Baltic Sea were characterized by active organic matter mineralization via sulfate reduction and mixing induced secondary reactions taking place in the suboxic zone. This included the removal of dissolved sulfide due to iron oxide reduction with simultaneous liberation of PO4 into the interstitial waters. High surface near P reservoirs existed due to internal P cycling within the sediments, which was in turn driven by continuous re-oxidation of the reduced iron by downwards transported oxygen. These reservoirs were only actually released into the water column during bottom water oxygen deficiency situations, when the iron re-oxidation was inhibited.
This also applies for sediments of the Gulf of Finland and the deeper Baltic Sea basins Bornholm Basin and Gdanks basin, where temporary hypoxic conditions are responsible for recurrent benthic phosphate release.
The widespread occurring phosphate adsorption on sedimentary solid iron phases is a much debated ecosystem service of marine sediments. As discussed in this work, the sedimentary P liberation rates and pools of readily bio-available dissolved phosphate can be substantial in Baltic Sea muddy sediments. Actual phosphate fluxes across the sediment-water interface, though, are relatively small because phosphate is scavenged by adsorption on iron oxyhydroxides that are usually an integral part of coastal marine sediments if overlain by oxic bottom waters. Although muddy sediments often show only an oxic layer of only few millimeters thickness, adsorption capacities of iron oxyhydroxides are large enough to substantially retain P from being liberated into the water column. Falling under reducing conditions, iron oxyhydroxides are re-dissolved, liberating high amounts of PO4 into the surrounding waters. While permanently oxic sediments will preserve adsorbed P, permanently anoxic sediments steadily release mineralized P into the water column. However, sedimentary environments of oscillating redox conditions are predestined for high, burst-like benthic P fluxes. Especially in a quasi isolated environment like the Baltic Sea, with high nutrient inputs but only few sinks, these internal recycling processes promote eutrophication in the long-term. Further expanding hypoxia and anoxia in the Baltic Sea with a subsequent loss of benthic fauna and altered nutrient dynamics in the surface sediments may be the consequence.
Background: Despite the growing concern over its potentially severe side effects and considerable economic burden, stress ulcer prophylaxis (SUP) is still frequently prescribed to patients in medical non-intensive care units. Recent data indicate that the situation is similar in surgical departments. Currently, data on the concepts within and regulation of routine SUP practice in surgical departments are sparse. The present study was designed to examine the current practice of SUP in Mecklenburg West Pomerania, Germany, and to identify possible reasons for the dissociation of medical literature and clinical practice. Methods: A questionnaire-based survey was conducted to elucidate current SUP practices in surgical departments of acute care hospitals in Mecklenburg Western Pomerania, Germany. Results: In most surgical departments (68%), a standard operating procedure (SOP) for SUP had not been developed. In departments with an existing SOP, 47.6% of responding medical staff members (MSM) with prescribing authority did not know of its existence. Of the MSMs aware of the existence of an SUP-SOP, only 42.9% indicated that they were familiar with its content. Critical re-evaluation of SUP indications upon transfer from the intensive care unit (ICU) to the general hospital ward (GHW) and before hospital discharge was performed frequently or systematically by only about half of the responding MSMs. Discussion: In the face of continued massive over-prescription of SUP in the perioperative routine, the development of easy-to-use local guidelines and their strict implementation in the clinical routine, as well as intensified medial education on this subject, may be effective tools to reduce acid-suppressive medication (ASM) associated side effects and economic burden.
Introduction: Multiparametric MRI (mpMRI) and MRI targeted biopsies (MRtb) are a new standard in prostate cancer (PCa) screening and diagnosis. Guidelines already include this approach for patients at risk. We aimed to gather information from German urologists about their knowledge, routine use, and attitude toward mpMRI and consecutive biopsy methods. Materials and Methods: An anonymous online questionnaire was sent via Survey Monkey to the members of the German Society of Urology (DGU). Statistical analyses were performed using SPSS version 25.0. Results: 496 members with a median age of 48.6 years (±11.7) participated in the survey. The majority rated mpMRI of the prostate as a very useful diagnostic tool (72.7%). MRtb of the prostate was considered as very advantageous (71.5%). MpMRI was used by 95.9%, and 83.2% also recommended MRtb predominantly in clinical institutions. For targeted biopsy, MRI-ultrasound fusion biopsy was clearly favored (75.8%). MpMRI was mostly used in patients with previously negative biopsy (90.9%) and in patients under active surveillance (60.9%). Arguments against the use of prostate mpMRI are costs (84.9%) and/or lack of sufficient radiological infrastructure (17.4%). Conclusion: Our data illustrate the meanwhile high acceptance and clinical use of the prostate mpMRI and MRtb in Germany.
Magnetic reconnection is a ubiquitous phenomenon observed in a wide range of magnetized plasmas from magnetic confinement fusion devices to space plasmas in the magnetotail. The process enables the release of accumulated magnetic energy by rapid changes in magnetic topology, heating the plasma in the vicinity of the reconnection site, generating fast particles and allowing a wealth of instabilities to grow. This thesis reports on the results from a newly constructed linear, cylindrical and modular guide field reconnection experiment with highly reproducible events, VINETA.II. A detailed analysis of the reconnecting current sheet properties on a macroscopic and microscopic scale in time and space is presented. In the experiment, four parallel axial wires create a figure-eight in-plane magnetic field with an X-line along the central axis, as well as an axial inductive field that drives magnetic reconnection. Particle-in-cell simulations show that the axial current is limited by sheaths at the boundaries and that electrostatic fields along the device axis always set up in response to the induced electric field. Current sheet formation requires an additional electron current source, realized as a plasma gun, which discharges into a homogeneous background plasma created by a rf antenna. The evolution of the plasma current is found to be dominantly set by its electrical circuit. The current response to the applied electric field is mainly inductive, which in turn strongly influences the reconnection rate. The three-dimensional distribution of the current sheet is determined by the magnetic mapping of the plasma gun along the sheared magnetic field lines, as well as by radial cross-field expansion. This expansion is due to a lack of equilibrium in the in-plane force balance. Resistive diffusion of the magnetic field by E=η j is found to be by far insufficient to account for the high reconnection rate E=-dΨ/dt at the X-line, indicating the presence of large electrostatic fields which do not contribute to dissipative reconnection. High-frequency magnetic fluctuations are observed throughout the current sheet which are compared to qualitatively similar observations in the Magnetic Reconnection Experiment (MRX, Princeton). The turbulent fluctuation spectra in both experiments display a spectral kink near the lower hybrid frequency, indicating the presence of lower hybrid type instabilities. In contrast to the expected perpendicular propagation of mainly electrostatic waves, an electromagnetic wave is found in VINETA.II that propagates along the guide field and matches the whistler wave dispersion. Good correlation is observed between the local axial current density and the fluctuation amplitude across the azimuthal plane. Instabilities driven by parallel drifts can be excluded due to the large required drift velocities or low resulting phase velocities that are not observed. It is instead suggested that a perpendicular, electrostatic lower hybrid mode indeed exists that resonantly excites a parallel, electromagnetic whistler wave through linear mode conversion. The resulting fluctuations are found to be intrinsic to the localized current sheet and are independent of the slower reconnection dynamics. Their amplitude is small compared to the in-plane fields, and have a negligible contribution to anomalous resistivity through momentum transport in the present parameter regime.
In the search for new antifungal agents, this study dealt with the antimicrobial screening, extraction, isolation, structural elucidation as well as selective biological investigations of the isolated compounds. In addition, the impact of the culture conditions on growth and on biosynthesis of bioactive compounds was also studied. Besides, selective cyanobacteria were axenized and the taxonomy as well as the genetic relationship of axenic cyanobacteria that produced bioactive compounds with some other cyanobacteria was identified basing on the 16S rRNA gene sequences. 22 Vietnamese and 6 German cyanobacterial strains were screened for their antifungal activity using the agar diffusion assay. Among them, the MeOH/water extract from the biomass obtained from a laboratory culture of strain Bio 33, isolated from the Baltic Sea near Rügen Island, exhibited a specific antifungal activity against Candida maltosa and others human pathogenous fungi such as Candida albicans, Candida krusei, Aspergillus fumigatus, Microsporum gypseum, Trichophyton rubrum and Mucor sp. Besides, it was very impressed that extracts of strain Bio 33 showed no antibacterial activity against Escherichia coli, Pseudomonas aeruginosa, Bacillus subtilis, and Staphylococcus aureus. The taxonomy basing on 16S rRNA gene sequence of the axenic Bio 33 identified this strain as Anabaena cylindrica species. As a result of the bioassay-guided fractionation of the crude MeOH/water extract, four new lipopeptides, named balticidins A – D, were isolated. These lipopeptides represent a new structural type with the co-occurrence of a glycosylated cyclic peptide, a fatty acid containing chlorine and a disaccharide moiety. The main active fraction isolated from the MeOH/water extract of the biomass of Bio 33 which contains the four lipopeptides exhibited only marginal cytotoxic activity against the human bladder carcinoma cell line 5637 (IC50 = 93 μg/ml). The weak cytotoxic activity and the absence of antibacterial effects in the used in vitro test systems opens a promising future for further investigations to clarify the antifungal mechanism and for in vivo applications of the new lipopeptides. Different media, temperature, light intensity and period of irradiance, the depletion of nitrate and the trace element cobalt were investigated to figure out conditions at which Bio 33 produces maximum of balticidins under laboratory conditions. Temperature was the most apparent factor influencing the growth of Bio 33 and the production of balticidins. Bio 33 grew best in BG 11 medium plus 0.5% NaCl at 26°C, under white fluorescent continuous light and a light intensity of 20 μmol photons m-2 s-1. Nevertheless, under the same conditions, 22.5°C was the best temperature for the production of balticidins. Besides, harvesting of Bio 33 during the logarithmic growth phase, particularly at 20th day, should supply approximately maximum quantity of balticidins. At 22.5°C and 20 μmol photons m-2 s-1 under 24 h continuous irradiance, the depletion of nitrate had no negative effect on the growth and concentration of balticidin A but increased balticidin B and decreased balticidin C; the absence of cobalt slightly decreased the growth but had no clear effect on the production of balticidins. On the other hand, extracts of the culture medium of the Vietnamese cyanobacterium TVN40, exhibited antifungal activity against Candida maltosa and weak antibacterial activity. Extraction of the culture medium with XAD-16 and elution of the XAD-bounded compounds by different solvents resulted in five fractions (water, 80% MeOH, 100% MeOH, acetone, dichloromethan). Four compounds have been isolated from the 80% MeOH fraction and one was identified as a dioxindole derivative. Structural elucidation of the other three compounds is still in progress. TVN40 was formerly identified as an Anabaena sp. according to the morphological properties, but the 16S rRNA gene sequence confirms that the strain belongs to the genus Nostoc. Microscopic examination of TVN40 revealed that the filamentous strain was not a unialgal but a mixed culture with strange round cells (SRCs) - a unicellular cyanobacterium belonging to the order Chroococcales. Laboratory cultures of the pure filamentous strain TVN40, the isolated SRCs and the mixed culture of both strains were established. Both TVN40 and SRC culture media were responsible for the antibacterial activity against B. subtilis, S. aureus and E. coli. However, only the extract of the culture medium of TVN40 was active against C. maltosa. The supplement of cobalt enhanced the antimicrobial activity of the culture medium. Pure strains showed higher activity in comparison to the mixed culture of TVN40 and SRC.
Background: Intraductal papillary mucinous neoplasms (IPMNs) display diverse macroscopic, histological, and immunohistochemical characteristics with typical morphological appearance in magnetic resonance imaging. Depending on those, IPMNs may show progression into invasive carcinomas with variable frequency. Overall, IPMN-associated invasive carcinomas are found in about 30% of all IPMNs, revealing phenotpyes comparable with conventional ductal adenocarcinomas or mucinous (colloid) carcinomas of the pancreas. In Sendai-negative side-branch IPMNs, however, the annual risk of the development of invasive cancer is 2%; thus, risk stratification with regard to imaging and preoperative biomarkers and cytology is mandatory. Methods and Results: The present study addresses the radiological and interventional preoperative measures including histological features to determine the risk of malignancy and the prognosis of IPMNs. Conclusion: While preoperative imaging largely relies on the detection of macroscopic features of IPMNs, which are associated with a divergent risk of malignant behavior, in resected specimens the determination of the grade of dysplasia and the detection of an invasive component are the most important features to estimate the prognosis of IPMNs.
Introduction: Inhibition of androgen synthesis by abiraterone acetate (AA) entails enhanced overall survival rates and clinical benefit for patients with locally advanced and metastasized prostate cancer (PC). The expression of heat shock protein 27 (HSP27) is generally associated with cytoprotection and was demonstrated to mediate chemoresistance under cytostatic therapy, for instance, docetaxel treatment. In this study, we investigated the impact of AA treatment on HSP27 expression and PC cell growth. Materials and Methods: HSP27 expression levels in docetaxel and AA-treated PC cell lines LNCaP and PC-3 were determined by SDS PAGE and Western blot analysis. Proliferation assays were performed using a CASY Cell Counter and Analyzer Model TT (Roche Applied Science). Results: Despite significantly increased HSP27 expression in PC cells incubated with docetaxel, Western blot analysis implicated a significant reduction of the cytoprotective HSP27 in AA-treated PC cells. Notably, HSP27 stably overexpressed in PC-3-HSP27 cells did not appear as an HSP27-mediated proliferation benefit in the presence of AA as shown in docetaxel incubation studies. Conclusion: In contrast to repeatedly demonstrated HSP27-driven chemoresistance related to chemotherapeutics, our results may constitute a broader molecular mode of action of AA chemotherapy. AA efficacy may exert an HSP27 suppressive role that goes beyond the primarily assumed inhibition of androgen biosynthesis.
Abstract
Type 1 diabetes mellitus (T1DM) represents one of the most common chronic diseases in childhood. It is associated with high morbidity and mortality rates due to metabolic dysregulation, immunosuppressive effects, and a predisposition to fungal infections. Candidiasis is a severe infection and its prevalence has increased throughout the last decades. We report the case of a 19‐year‐old female patient admitted to our intensive care unit with T1DM and Candida infection associated with severe metabolic acidosis. In the absence of response to high dose catecholamine cardiovascular therapy and the presence of severe metabolic acidosis, a CytoSorb cartridge was implemented into the extracorporeal dialysis circuit resulting in a stabilization of hemodynamics accompanied by a tremendous decrease in vasopressor requirements, control of the hyperinflammatory response, as well as a resolution of metabolic acidosis and regeneration of renal function. Treatment with CytoSorb was safe and feasible without technical problems. Notably, this is the first case description reporting on the effects of CytoSorb in a patient with Candida infection as part of T1DM.
Fibroblasts contribute to approximately 20% of the non-cardiomyocytic cells in the heart. They play important roles in the myocardial adaption to stretch, inflammation, and other pathophysiological conditions. Fibroblasts are a major source of extracellular matrix (ECM) proteins whose production is regulated by cytokines, such as TNF-α or TGF-β. The resulting myocardial fibrosis is a hallmark of pathological remodeling in dilated cardiomyopathy (DCM). Therefore, in the present study, the secretome and corresponding transcriptome of human cardiac fibroblasts from patients with DCM was investigated under normal conditions and after TNF-α or TGF-β stimulation. Secreted proteins were quantified via mass spectrometry and expression of genes coding for secreted proteins was analyzed via Affymetrix Transcriptome Profiling. Thus, we provide comprehensive proteome and transcriptome data on the human cardiac fibroblast’s secretome. In the secretome of quiescent fibroblasts, 58% of the protein amount belonged to the ECM fraction. Interestingly, cytokines were responsible for 5% of the total protein amount in the secretome and up to 10% in the corresponding transcriptome. Furthermore, cytokine gene expression and secretion were upregulated upon TNF-α stimulation, while collagen secretion levels were elevated after TGF-β treatment. These results suggest that myocardial fibroblasts contribute to pro-fibrotic and to inflammatory processes in response to extracellular stimuli.
Platelet adhesion and spreading at the sites of vascular injury is vital to hemostasis. As an integral part of the innate immune system, platelets interact with opsonized bacterial pathogens through FcγRIIA and contribute to host defense. As mechanoscavangers, platelets actively migrate and capture bacteria via cytoskeleton-rich, dynamic structures, such as filopodia and lamellipodia. However, the role of human platelet FcγRIIA in cytoskeleton-dependent interaction with opsonized bacteria is not well understood. To decipher this, we used a reductionist approach with well-defined micropatterns functionalized with immunoglobulins mimicking immune complexes at planar interfaces and bacteriamimetic microbeads. By specifically blocking of FcγRIIA and selective disruption of the platelet cytoskeleton, we show that both functional FcγRIIA and cytoskeleton are necessary for human platelet adhesion and haptotaxis. The direct link between FcγRIIA and the cytoskeleton is further explored by single-particle tracking. We then demonstrate the relevance of cytoskeleton-dependent differential mobilities of FcγRIIA on bacteria opsonized with the chemokine platelet factor 4 (PF4) and patient-derived anti-PF4/polyanion IgG. Our data suggest that efficient capture of opsonized bacteria during host-defense is governed by mobility dynamics of FcγRIIA on filopodia and lamellipodia, and the cytoskeleton plays an essential role in platelet morphodynamics at biological interfaces that display immune complexes.
How can powerful states best extract domestic concessions from their junior allies? What are the conditions under which the powerful state is more likely to succeed in inducing such domestic policy change? This article explores the link between US security commitments and Washington’s ability to attain favourable policy outcomes within the allied domestic arena. It provides an illustrative case of how the USA, using security guarantees as leverage, can enter allied domestic space and shape its decision-making process. After it was revealed that Latvia had served as a key node through which North Korea attempted to evade the sanctions regime, the USA, by playing its security guarantor card, pressured Riga to carry out substantial policy reforms in relation to its financial system. This approach yielded considerable results. In order to preserve the existing security arrangements with the dominant alliance member, Latvia offered significant policy concessions. This finding demonstrates that US security alliances come with side benefits that are often underrated or neglected in the scholarly literature.
Protein engineering is essential for altering the substrate scope, catalytic activity and selectivity of enzymes for applications in biocatalysis. However, traditional approaches, such as directed evolution and rational design, encounter the challenge in dealing with the experimental screening process of a large protein mutation space. Machine learning methods allow the approximation of protein fitness landscapes and the identification of catalytic patterns using limited experimental data, thus providing a new avenue to guide protein engineering campaigns. In this concept article, we review machine learning models that have been developed to assess enzyme-substrate-catalysis performance relationships aiming to improve enzymes through data-driven protein engineering. Furthermore, we prospect the future development of this field to provide additional strategies and tools for achieving desired activities and selectivities.
Indium-cluster anions In−nare probed for delayed dissociation by photoexcitation in a multi-reflection time-of-flight device. In addition to prompt dissociation with below-microsecond decay constants, we observe reactionson timescales of several tens to hundreds of microseconds. These time-resolved decay-rate measurements reveala power-law behavior in time which can be traced back to the clusters’ energy distribution due to their productionby laser ablation in high vacuum. Modeling energy distributions from such a production allows us to connect thecluster-specific dissociation energy with the ensemble temperature through experimentally determined power-law exponents.
Streptococcus pneumoniae (pneumococci) are Gram-positive cocci and commensals of the human upper respiratory tract. Pneumococcal pathogenesis requires adherence to host cells and dissemination through cellular barriers and to evade host defense mechanisms. The Pneumococcal surface protein C (PspC) is an important virulence factor which has a crucial role in pneumococcal adhesion to host cells and immune evasion by manipulating the host complement system. To elucidate the pneumococcal adherence and uptake mechanism via factor H glycosaminoglycans (dermatan sulfate and heparin) were employed as competitive inhibitors in infection experiments with epithelial cells or human polymorphonuclear leukocytes (PMNs). Glycosaminoglycans significantly inhibited the FH mediated pneumococcal adherence and subsequent invasion to host epithelial cells. Furthermore, the short consensus repeats of FH which promotes the adhesion of pneumococci to host cells were identified by blocking experiments with domain mapped antibodies for specific regions of FH. Moreover, this study indicates that FH acts as adhesion molecule via cellular receptors recognized as integrin CR3 on human PMNs. Binding of Factor H loaded pneumococci to integrins CR3 was assessed by flow cytometry. Pneumococci coated with Factor H showed a significantly increased association with PMNs. This interaction was blocked by anti-CR3 antibodies and Pra1. This project further aims to study mechanisms of pneumococcal endocytosis by host cells, their intracellular fate, and the pathogen induced host cell signal transduction cascades including the calcium signaling upon pneumococcal infection of host cells via the PspC-hpIgR interaction. To assess now the role of protein tyrosine kinases (PTKs) during pneumococcal infection via PspC, cell culture infections were performed in presence of pharmacological inhibitors of PTKs and MAPKs or by employing genetic interference techniques. Blocking the function of Src or ER1/2 and JNK and genetic-knock down of Src and FAK reduced significantly internalization of pneumococci. These data indicated the importance of a coordinated signaling between Src PTKs, ERK1/2, and JNK during PspC-pIgR-mediated uptake of pneumococci by host epithelial cells. The impact of host cells intracellular calcium concentrations on pneumococcal PspC-hpIgR mediated internalization was studied. Intracellular calcium measurement of epithelial cells performed in the presence of pneumococci suggested a calcium influx in host epithelial cells and importantly this calcium influx was PspC- hpIgR specific as pspC-deficient pneumococci were unable to mediate calcium mobilization in host cells. The increase in intracellular calcium [Ca2+]i was dependent on phospholipase C as pretreatment of cells with a phospholipase C-specific inhibitor abolished the increase in [Ca2+]i. Furthermore, role of host intracellular calcium concentrations during pneumococcal internalization was demonstrated by employing specific pharmacological inhibitors and calcium chelators in epithelial cell culture infection assays. The results revealed that elevated host cells calcium concentrations diminished pneumococcal internalization while lower calcium concentration in host epithelial cells promoted pneumococcal uptake. This study further demonstrates that dynamin, clathrin and caveolin play a key role during pneumococcal endocytosis into host cells via PspC-hpIgR. The use of specific pharmacological inhibitors or genetic interference approaches against dynamin, clathrin and caveolin in epithelial cell culture infection assays significantly blocked pneumococcal uptake. Furthermore, confocal microscopy revealed that pneumococci co-localize with clathrin. At later stages of the infection the pathogen is sorted to early, late and recycling endosomes as indicated by co-localization of pneumococci with endosomal markers such as Rab5, Rab4, Rab 7, and Lamp1. In order to get further insights into PspC-hpIgR mediated uptake mechanisms, a chimeric PspC was constructed and expressed heterologously on the surface of Lactococcus lactis. Immunofluorescence staining, immunoblot and flow cytometric analysis of L. lactis confirmed the expression of PspC on the bacterial surface. Moreover the ability of recombinant lactococci expressing PspC to adhere to and to invade pIgR-expressing epithelial cells confirmed the functional activity of PspC when exposed on the lactococcal surface. PspC expressing lactococci confirmed the specificity of PspC-hpIgR mediated endocytosis in host epithelial cells as PspC deficient lactococci were not taken up by these host cells. Confocal microscopic analysis demonstrated that only PspC expressing lactococci were sorted to early, late and recycling endosomes, similar to the intracellular fate of S. pneumoniae.
Introduction: The environmental bacterium Burkholderia pseudomallei causes the often fatal and massively underreported infectious disease melioidosis. Antigens inducing protective immunity in experimental models have recently been identified and serodiagnostic tools have been improved. However, further elucidation of the antigenic repertoire of B. pseudomallei during human infection for diagnostic and vaccine purposes is required. The adaptation of B. pseudomallei to very different habitats is reflected by a huge genome and a selective transcriptional response to a variety of conditions. We, therefore, hypothesized that exposure of B. pseudomallei to culture conditions mimicking habitats encountered in the human host might unravel novel antigens that are recognized by melioidosis patients.
Methods and results: In this study, B. pseudomallei was exposed to various stress and growth conditions, including anaerobiosis, acid stress, oxidative stress, iron starvation and osmotic stress. Immunogenic proteins were identified by probing two-dimensional Western blots of B. pseudomallei intracellular and extracellular protein extracts with sera from melioidosis patients and controls and subsequent MALDI-TOF MS. Among B. pseudomallei specific immunogenic signals, 90 % (55/61) of extracellular immunogenic proteins were identified by acid, osmotic or oxidative stress. A total of 84 % (44/52) of intracellular antigens originated from the stationary growth phase, acidic, oxidative and anaerobic conditions. The majority of the extracellular and intracellular protein antigens were identified in only one of the various stress conditions. Sixty-three immunoreactive proteins and an additional 38 candidates from a literature screening were heterologously expressed and subjected to dot blot analysis using melioidosis sera and controls. Our experiments confirmed melioidosis-specific signals in 58 of our immunoproteome candidates. These include 15 antigens with average signal ratios (melioidosis:controls) greater than 10 and another 26 with average ratios greater than 5, including new promising serodiagnostic candidates with a very high signal-to-noise ratio.
Conclusion: Our study shows that a comprehensive B. pseudomallei immunoproteomics approach, using conditions which are likely to be encountered during infection, can identify novel antibody targets previously unrecognized in human melioidosis.
Deciphering the influence of Streptococcus pneumoniae global regulators on fitness and virulence
(2019)
Streptococcus pneumoniae (S. pneumoniae; the pneumococcus) is a Gram-positive, aerotolerant, and opportunistic bacteria, which colonizes the upper respiratory tract of human. S. pneumoniae can further migrate to other sterile parts of the body, and causes local as well as fatal infections like, pneumonia, septicaemia and meningitis. Due to incomplete amino acid pathways, pneumococci are auxotrophic for eight different amino acids including glutamine and arginine. The pneumococcus has adapted to the various host environmental conditions and a number of systems are dedicated for the transport and utilization of nutrients such as monosaccharides, amino acids and oligopeptides.
In this study the amino acid metabolism was characterised by 15N-isotopologue profiling in two different pneumococcal strains, D39 and TIGR4. Efficient uptake of a labelled amino acids mixture of 15N-labelled amino acids showed that S. pneumoniae has a preference for the amino acids transport instead of a de novo biosynthesis. It is known that glutamine (Gln) serves as main nitrogen source for S. pneumoniae. The 15N-labelled Gln used in this study demonstrated an efficient 15N-enrichment of Glu, Ala, Pro and Thr. Minor enrichment was seen for the amino acids Asp, Ile, Leu, Phe, Tyr, and Val. Remarkably, labelled Gly and Ser could be determined in strain TIGR4, whereas for strain D39 these two labelled amino acids were not detected. This confirms earlier studies with 13C-labelled glucose, which showed the biosynthesis of Ser out of Gly. Strain TIGR4 was able to grow in chemically-defined medium depleted of Gly confirming that Gly can be synthesized out of serine by the action of the enzyme serine hydroxymethyltransferase (SHMT).
The transcriptional regulator GlnR controls the Gln and Glu metabolism in S. pneumoniae. Hence, the impact of the repressor GlnR on amino acids metabolism was also studied. An increased 15N-enrichment was determined for Ala and Glu in both used pneumococcal strains, while an increased level of Pro was only measured in the isogenic glnR-mutant of non-encapsulated D39.
Arginine can also serve as nitrogen source in strain TIGR4. The arginine deiminase system metabolizes Arg into ornithine, carbamoyl phosphate and CO2 by the generation of 1 ATP and 2 mol NH3. Because of the truncation of the arcA gene strain D39 lacks arginine deiminase activity and has thus no functional ADS system. When 15N-Arg was added for growth, only in strain TIGR4, thirteen (13) labelled amino acids were detected with the highest enrichment for Ala, Glu and Thr. Genes coding for the enzymes of the arginine metabolism and for arginine uptake are regulated by the activator ArgR2 in strain TIGR4. Inactivation of ArgR2 was not accompanied by an enrichment of labelled amino acids, when the argR2-mutant was grown with 15N-labelled Arg indicative of the important role of ArgR2.
The bicistronic operon arcDT encoding the arginine/ornithine transporter ArcD and a putative peptidase ArcT belong to the peptidase family M20. The in silico comparison of structures revealed a significant homology of ArcT to PepV of L. delbrueckii and to Sapep of S. aureus known as carboxypeptidase. ArcT was heterologously expressed in E. coli and purified under reducing conditions. An enzymatic reaction was established and several dipeptides like Ala-Arg, Arg-Ala, and Ala-Asp were used as substrates. In addition, the dependency on divalent cations was analysed. Cleavage of the dipeptide Ala-Arg was detected in the presence of Mn2+ as cofactor under reducing conditions. Reduced peptidase activity was observed when Zn2+ was added. No cleavage of the tripeptide Ala-Ala-Arg could be shown indicating that ArcT acts as dipeptidase with the preference to the Arg residue at the C-terminal end.
Bacterial meningitis caused by S. pneumoniae was studied in an in vivo proteomic analysis. In a mouse meningitis model S. pneumoniae was isolated from the cerebrospinal fluid (CSF) by a filter extraction step. The MS analysis identified AliB and ComDE only from CSF isolated pneumococci indicating that these proteins are expressed under infection conditions. Mice infected with D39 wild-type and isogenic aliB, comDE and aliB-comDE double knockout mutants showed significantly less number of pleocytosis in the CSF and lower bacterial load in the blood compared to the wild-type. The results indicate that AliB and ComDE play an important role during meningitis.
Phenotypic characterization was carried out to identify differences between the wild-type and the aliB-, comDE- and aliB-comDE double mutants. Oxidative stress conditions were induced by the application of hydrogen peroxide or paraquat during growth in a chemically-defined medium similar to the CSF. No alteration in growth and survival of these mutants compared to the wild-type was observed suggesting that oxygen radicals play not an important role during the progression of meningitis. In addition, no differences of AliB expression was detected in the ComDE deficient D39. No impact of aliB and comDE-mutation on the expression of different virulence factors like pneumolysin or proteins involved in capsular biosynthesis was detected.
In vitro proteome analysis was performed to compare the wild-type to the AliB, and ComDE deficient D39 in the early and mid logarithmic growth phase. More than 70 % of theoretically expressed proteins were identified. In the aliB-mutant 33 proteins were differentally expressed in the early growth phase and 50 proteins differed during mid log growth. For the comDE mutant 24 and 11 proteins differed in expression in these two growth phases. Interestingly, high level of AliA expression was identified in all samples. The aliB-mutant had a decreased abundance of the proteins resembling an oligopeptide ABC transporter (AmiA, AmiC, AmiD, AmiE). In addition, another ABC transporter for iron transport encoded by spd_1607 to spd_ 1610 was higher expressed in the aliB-mutant. In the ComDE deficient mutant lower abundance of the Ami transporter sytem was identified. An increased abundance of proteins involved in the pyrimidine metabolism (PyrF, PyrE, PyrDb, PyrB and PyrR) was recognized only in the early growth phase of the comDE-mutant. These analyses demonstrate the marginal changes in protein synthesis during growth of S. pneumoniae. These studies demonstrated the adaptation of the proteome of S. pneumoniae to different growth conditions and the impact of regulatory proteins on the availability of carbon and nitrogen sources.
The interdisciplinary study investigates the relationship between Norse and Saami peoples in the medieval period and focuses on the multifaceted portrayal of Saami peoples in medieval texts. The investigative analysis is anchored in postcolonial methodologies and argues for the inherent need to decolonise the medieval source-material as well as recent historiography. This is achieved by presenting the historiographic and political background of research into Norse-Saami relations, before introducing an overview of textual sources discussing Saami peoples from the classical period to the late 1400s, an analysis of the textual motifs associated with the Saami in medieval literature (their relevance and prevalence), geo-political affairs, trading relations, personal relations and Saami presence in the south. By using decolonising tools to read Norse-Saami relations in medieval texts, influenced by archaeological material and postcolonial frameworks, the study challenges lingering colonial assumptions about the role of the Saami in Norse society. The current research episteme is re-adjusted to offer alternative readings of Saami characters and emphasis is put on agency, fluidity and the dynamic realities of the Saami medieval pasts.
Decreased inflammatory profile in oral leukoplakia tissue exposed to cold physical plasma ex vivo
(2023)
Background
Oral leukoplakia (OL) is an unfavorable oral disease often resistant to therapy. To this end, cold physical plasma technology was explored as a novel therapeutic agent in an experimental setup.
Methods
Biopsies with a diameter of 3 mm were obtained from non-diseased and OL tissues. Subsequently, cold atmospheric pressure plasma (CAP) exposure was performed ex vivo in the laboratory. After 20 h of incubation, biopsies were cryo-conserved, and tissue sections were quantified for lymphocyte infiltrates, discriminating between naïve and memory cytotoxic and T-helper cells. In addition, the secretion pattern related to inflammation was investigated in the tissue culture supernatants by quantifying 10 chemokines and cytokines.
Results
In CAP-treated OL tissue, significantly decreased overall lymphocyte numbers were observed. In addition, reduced levels were observed when discriminating for the T-cell subpopulations but did not reach statistical significance. Moreover, CAP treatment significantly reduced levels of C-X-C motif chemokine 10 (CXCL10) and granulocyte-macrophage colony-stimulating factor in the OL biopsies' supernatants. In idiopathically inflamed tissues, ex vivo CAP exposure reduced T-cells and CXCL10 as well but also led to markedly increased interleukin-1β secretion.
Conclusion
Our findings suggest CAP to have immuno-modulatory properties, which could be of therapeutic significance in the therapy of OL. Future studies should investigate the efficacy of CAP therapy in vivo in a larger cohort.
Free light chains kappa (FLCκ) in cerebrospinal fluid (CSF) are a part of the intrathecal immune response. This observational study was conducted to investigate the effects of different disease-modifying therapies (DMT) on the humoral intrathecal immune response in the CSF of patients with multiple sclerosis (MS). FLCκ were analyzed in CSF and serum samples from MS patients taking DMT (n = 60) and those in a control cohort of treatment-naïve MS patients (n = 90). DMT was classified as moderately effective (including INFß-1a, INFß-1b, glatiramer acetate, dimethyl fumarate, teriflunomide, triamcinolone); highly effective (including fingolimod, daclizumab) and very highly effective (alemtuzumab, natalizumab, rituximab/ocrelizumab, mitoxantrone). FLCκ were measured using a nephelometric FLCκ kit. Intrathecal FLCκ and IgG concentrations were assessed in relation to the hyperbolic reference range in quotient diagrams. Intrathecal FLCκ concentrations and IgG concentrations were significantly lower in samples from the cohort of MS patients taking very highly effective DMT than in samples from the cohort of MS patients taking highly effective DMT and in the treatment-naïve cohort (FLCκ: p = 0.004, p < 0.0001 respectively/IgG: p = 0.013; p = 0.021). The reduction in FLCκ could contribute to an anti-inflammatory effect in the CNS through this mechanism. There was no difference in the appearance of CSF-specific oligoclonal bands (p = 0.830). Longitudinal analyses are required to confirm these results.
Background
Previous work has focused on speckle-tracking echocardiography (STE)-derived global longitudinal and circumferential peak strain as potential superior prognostic metric markers compared with left ventricular ejection fraction (LVEF). However, the value of regional distribution and the respective orientation of left ventricular wall motion (quantified as strain and derived from STE) for survival prediction have not been investigated yet. Moreover, most of the recent studies on risk stratification in primary and secondary prevention do not use neural networks for outcome prediction.
Purpose
To evaluate the performance of neural networks for predicting all cause-mortality with different model inputs in a moderate-sized general population cohort.
Methods
All participants of the second cohort of the population-based Study of Health in Pomerania (SHIP-TREND-0) without prior cardiovascular disease (CVD; acute myocardial infarction, cardiac surgery/intervention, heart failure and stroke) and with transthoracic echocardiography exams were followed for all-cause mortality from baseline examination (2008-2012) until 2019.
A novel deep neural network architecture ‘nnet-Surv-rcsplines’, that extends the Royston-Parmar- cubic splines survival model to neural networks was proposed and applied to predict all-cause mortality from STE-derived global and/or regional myocardial longitudinal, circumferential, transverse, and radial strain in addition to the components of the ESC SCORE model. The models were evaluated by 8.5-year area-under-the-receiver-operating-characteristic (AUROC) and (scaled) Brier score [(S)BS]and compared to the SCORE model adjusted for mortality rates in Germany in 2010.
Results
In total, 3858 participants (53 % female, median age 51 years) were followed for a median time of 8.4 (95 % CI 8.3 – 8.5) years. Application of ‘nnet-Surv-rcsplines’ to the components of the ESC SCORE model alone resulted in the best discriminatory performance (AUROC 0.9 [0.86-0.91]) and lowest prediction error (SBS 21[18-23] %). The latter was significantly lower (p <0.001) than the original SCORE model (SBS 11 [9.5 - 13] %), while discrimination did not differ significantly. There was no difference in (S)BS (p= 0.66) when global circumferential and longitudinal strain were added to the model. Solely including STE-data resulted in an informative (AUROC 0.71 [0.69, 0.74]; SBS 3.6 [2.8-4.6] %) but worse (p<0.001) model performance than when considering the sociodemographic and instrumental biomarkers, too.
Conclusion
Regional myocardial strain distribution contains prognostic information for predicting all-cause mortality in a primary prevention sample of subjects without CVD. Still, the incremental prognostic value of STE parameters was not demonstrated. Application of neural networks on available traditional risk factors in primary prevention may improve outcome prediction compared to standard statistical approaches and lead to better treatment decisions.
The fear of somatic sensations is highly relevant in the etiology and maintenance of various disorders. Nevertheless, little is known about this fear of body symptoms and many questions are yet unanswered. Especially physiological studies on interoceptive threat are rare. Therefore, the present thesis investigated defensive mobilization, autonomic arousal, and brain activation during the anticipation of, exposure to, and recovery from unpleasant body sensations. Symptoms were provoked using a standardized hyperventilation procedure in a sample of high (and as controls: low) anxiety sensitive individuals - a population high at risk for developing a panic disorder and high in fear of internal body symptoms.
In study one, anxious apprehension was investigated during anticipation of interoceptive threat (somatic sensations evoked by hyperventilation) and exteroceptive threat (electric shock). Symptom reports, autonomic arousal, and defensive mobilization assessed by the startle eyeblink response were analyzed. Extending the knowledge on anticipation of interoceptive threat, study two investigated the neural networks activated during anxious apprehension of unpleasant body sensations. Symptom reports and startle response data were collected during a learning session after which participants high and low in fear of somatic symptoms attended a fMRI session anticipating threat (hyperventilation – learned to provoke unpleasant symptoms) or safety (normal breathing). Study three examined the actual exposure to internal body symptoms, investigating symptoms reports, autonomic arousal, and the startle eyeblink response during guided breathing (hyperventilation and, as a non-provocative comparison condition, normoventilation) and during recovery. And finally, study four addressed changes in the defensive mobilization during repeated interoceptive exposure via a hyperventilation procedure. High and low anxiety sensitive persons went through two guided hyperventilation and normoventilation procedures that were spaced one week apart while symptom reports, breathing parameters, and startle response magnitudes were measured.
In study one it was demonstrated that the anticipation of exteroceptive threat led to a defensive and autonomic mobilization in high and low anxiety sensitive individuals, while during interoceptive threat only high anxiety sensitive participants were characterized by a potentiated startle response and autonomic activation. Imaging data of study two revealed that 1) during anticipation of hyperventilation all participants were characterized by an increased activation of a fear network consisting of anterior insula/ orbitofrontal cortex and rostral parts of the dorsal anterior cingulate cortex/ dorsomedial prefrontal cortex, 2) high fear individuals showed higher anxious apprehension than low fear controls during the entire context (safe and threat conditions), indexed by an overall stronger activation of the described network, and 3) while low fear controls learned that (undisclosed to all participants) in the fMRI scanner the threat cue was not followed by an unpleasant hyperventilation task, high fear participants continued to show stronger fear network activation to this cue. In study three it was demonstrated, that the hyperventilation procedure led to a marked increase in somatic symptoms and to autonomic arousal. While high and low anxiety sensitive groups did not differ during hyperventilation, in the early recovery only high anxiety sensitive individuals showed defensive mobilization, indicated by potentiated startle response magnitudes, and increased autonomic arousal after hyperventilation as compared to after normoventilation. Substantiating these findings, in study four all participants reported more symptoms during hyperventilation than during normoventilation, in both sessions. Nevertheless, only high anxiety sensitive participants displayed a potentiation of startle response magnitudes after the first hyper- vs. normoventilation. One week later, when the exercise was repeated this potentiation was no longer present and thus both groups no longer differed in their defensive mobilization. Even more, the number of reported baseline symptoms decreased from session one to session two in the high-AS group. While high anxiety sensitive persons reported increased baseline anxiety symptoms in session one, groups did not anymore differ in session two.
These data indicate that the standardized hyperventilation procedure is a valid paradigm to induce somatic symptoms. Moreover, it induces anxious apprehension especially in persons highly fearful of internal body symptoms. The repetition of interoceptive exposure, however, reduces associated fear in highly fearful individuals. Thus, this paradigm might provide an innovative method to study anxious apprehension and also treatment effects in patients with panic disorder. The present findings are integrated and discussed in the light of the current literature.
The learning theory of panic disorder differs between panic attacks and anxious apprehension as distinct emotional states. Acute panic is accompanied by extreme fear, experience of strong body symptoms reflecting autonomic surge and flight tendencies. In contrast, anxious apprehension is associated with hypervigilance towards bodily sensations and increased distress when subtle somatic symptoms are identified. Following animal models, these clinical entities reflect different stages of defensive reactivity depending upon the imminence of interoceptive or exteroceptive threat cues with lowest distance to threat during panic attacks. We tested this model by investigating the dynamics of defensive reactivity in a large group of patients suffering from panic disorder and agoraphobia (PD/AG) prior to a multicenter controlled clinical trial. Three hundred forty-five patients participated in a standardized behavioral avoidance test (being entrapped in a small, dark chamber for 10 minutes). Defensive reactivity was assessed measuring avoidance and escape behavior, self reports of anxiety and panic symptoms, autonomic arousal (heart rate and skin conductance), and potentiation of the startle reflex before and during the exposure period of the behavioral avoidance test. While 125 patients showed strong anxious apprehension during the task (as indexed by increased reports of anxiety, elevated physiological arousal, and startle potentiation), 72 patients escaped from the test chamber. Active escape was initiated at the peak of the autonomic surge accompanied by an inhibition of the startle response as predicted by the animal model. These physiological responses were observed during 34 reported panic attacks as well. We found evidence that defensive reactivity in PD/AG patients is dynamically organized ranging from anxious apprehension to panic with increasing proximity of interoceptive threat. Importantly, the patients differed quite substantially according defensive reactivity during the behavioral avoidance test despite all patients received the same principal diagnosis. These differences can be explained in part by differences in the disposition according to two genetic variants previously associated with panic disorder. Patients carrying the risk variant of a polymorphism in the neuropeptide S receptor gene showed an overall increased heart rate during the whole behavioral avoidance test reflecting an enhanced sympathomimetic activation and consequently arousal level. During the entrapment situation in which heart rate further increased over an already elevated baseline level, risk variant carriers were prone to experience more panic symptoms. This is in line with the learning perspective of panic disorder, postulating that internal cues of elevated arousal increase the chance of experiencing another panic attack once they have been associated with aversive responses. Furthermore, the risk variant of a polymorphism in the monoamine oxidase A gene was observed to augment the occurrence of panic attacks and escape behavior preparation. In addition, we find evidence that suggest an enhanced resistance to corrective learning experiences as indicated by a lack of a reduction of avoiding and escaping behavior during repeated test chamber exposures in wait-list control patients carrying the risk gene variant. Both effects may strengthen the learning mechanism hypothesized to be involved in the pathogenesis of panic disorder. Exteroceptive and interoceptive cues previously associated with the initial panic attack might trigger subsequent attacks in risk allele carriers more rapidly while simultaneously the opportunity to dissolve once established associations due to contradictory experiences is limited. Now, differential dispositions regarding defensive reactivity in PD/AG patients has to be linked to mechanisms supposed to be involved in exposure based therapy. First outcome evaluations of the clinical trial indicated that a behavioral therapy variant suggested to be linked with higher fear activation during exposure exercises is more effective than another. Further analyses have to proof whether those patients showing a clear specific fear response during the behavioral avoidance test benefit more than others from exposure based therapy.
Simple Summary
Neuronal plasticity refers to the brain’s ability to adapt in response to activity-dependent changes. This process, among others, allows the brain to acquire memory or to compensate for a neurocognitive deficit. We analyzed adult FTSJ1-deficient mice in order to gain insight into the role of FTSJ1 in neuronal plasticity. These mice displayed alterations in the hippocampus (a brain structure that is involved in memory and learning, among other functions) e.g., in the form of changes in dendritic spines. Changes in dendritic spines are considered to represent a morphological hallmark of altered neuronal plasticity, and thus FTSJ1 deficiency might have a direct effect upon the capacity of the brain to adapt to plastic changes. Long-term potentiation (LTP) is an electrophysiological correlate of neuronal plasticity, and is related to learning and to processes attributed to memory. Here we show that LTP in FTSJ1-deficient mice is reduced, hinting at disturbed neuronal plasticity. These findings suggest that FTSJ1 deficiency has an impact on neuronal plasticity not only morphologically but also on the physiological level.
Abstract
The role of the tRNA methyltransferase FTSJ1 in the brain is largely unknown. We analyzed whether FTSJ1-deficient mice (KO) displayed altered neuronal plasticity. We explored open field behavior (10 KO mice (aged 22–25 weeks)) and 11 age-matched control littermates (WT) and examined mean layer thickness (7 KO; 6 WT) and dendritic spines (5 KO; 5 WT) in the hippocampal area CA1 and the dentate gyrus. Furthermore, long-term potentiation (LTP) within area CA1 was investigated (5 KO; 5 WT), and mass spectrometry (MS) using CA1 tissue (2 each) was performed. Compared to controls, KO mice showed a significant reduction in the mean thickness of apical CA1 layers. Dendritic spine densities were also altered in KO mice. Stable LTP could be induced in the CA1 area of KO mice and remained stable at for at least 1 h, although at a lower level as compared to WTs, while MS data indicated differential abundance of several proteins, which play a role in neuronal plasticity. FTSJ1 has an impact on neuronal plasticity in the murine hippocampal area CA1 at the morphological and physiological levels, which, in conjunction with comparable changes in other cortical areas, might accumulate in disturbed learning and memory functions.
Phylogenetic (i.e., leaf-labeled) trees play a fundamental role in evolutionary research. A typical problem is to reconstruct such trees from data like DNA alignments (whose columns are often referred to as characters), and a simple optimization criterion for such reconstructions is maximum parsimony. It is generally assumed that this criterion works well for data in which state changes are rare. In the present manuscript, we prove that each binary phylogenetic tree T with n ≥ 20k leaves is uniquely defined by the set Ak (T), which consists of all characters with parsimony score k on T. This can be considered as a promising first step toward showing that maximum parsimony as a tree reconstruction criterion is justified when the number of changes in the data is relatively small.
Background:
Arthroscopic treatment of femoroacetabular impingement syndrome (FAIS) has become a common procedure. However, meaningful long-term clinical outcomes have not been defined.
Purpose:
To define the minimal clinically important difference (MCID), substantial clinical benefit (SCB), and patient acceptable symptomatic state (PASS) for the modified Harris Hip Score (mHHS) at a minimum 10-year follow-up in patients undergoing arthroscopic treatment for FAIS and identify preoperative predictors for achievement of the MCID, SCB, and PASS.
Study Design:
Case-control study; Level of evidence, 3.
Methods:
A consecutive series of patients undergoing arthroscopic treatment for FAIS between 2007 and 2009 with a minimum 10-year follow-up was analyzed. Patient data included patient characteristics, radiographic parameters, and the pre- and postoperative mHHS and visual analog scale (VAS) for pain score. Paired t tests were used to compare the patient-reported outcome measures (PROMs). The MCID was determined by calculating half of the standard deviation, and SCB and PASS were calculated by the anchor method. Correlation and logistic regression analyses were conducted to identify predictors for the achievement of the MCID, SCB, and PASS.
Results:
A total of 44 patients (27 men, 17 women) were included. The mean age and body mass index were 42.2 years (range, 16-67 years) and 22.3 kg/m2 (range, 16.76-29.78 kg/m2), respectively. The MCID, absolute SCB, net change SCB, and PASS of the mHHS were calculated to be 19.6, 90.1, 31.5, and 84.4 points, respectively. Preoperative symptom duration was identified as an independent predictor for the achievement of meaningful clinical outcomes. The median symptom durations for patients who achieved the MCID, absolute SCB, net change SCB, and PASS were 11.7, 9.1, 9.0, and 10.8 months, respectively. The median symptom duration for patients who did not achieve the MCID, absolute SCB, net change SCB, and PASS were 15.8, 17.4, 17.3, and 18.4 months, respectively. No other statistically significant correlations were found.
Conclusion:
The preoperative duration of symptoms was identified as an independent predictor for achievement of the MCID, SCB, and PASS. These findings can be helpful in accelerating the transition to surgical treatment of FAIS.
Degradation of branched chain aliphatic and aromatic petroleum hydrocarbons by microorganisms
(2008)
The overall aim of the work was to investigate the ability of several Gram-positive bacteria including Mycocbacterium neoaurum SBUG 109, Nocardia cyriacigeorgica SBUG 1472 and Rhodococcus ruber SBUG 82 and the yeast Trichosporon mucoides SBUG-Y 801 to degrade and transform branched chain hydrocarbons which occur in petroleum and its fraction products such as gasoline or gas oil and which are known as important and recalcitrant environmental pollutants. Pristane, iso-pentylbenzene and sec-octylbenzene were used in this work as model compounds. These compounds represent significant groups of petroleum constituents (branched chain alkanes and aromatic hydrocarbons). Three bacteria and the yeast T. mucoides SBUG-Y 801 were selected in a screen of 16 hydrocarbon-utilizing strains in the SBUG collection and from 21 isolated hydrocarbon-utilizing strains from oil-contaminated habitats of Saudi Arabian Desert and of Vietnam. The bacteria were identified in cooperation with DSZM (Deutsche Sammlung von Mikroorganismen und Zellkulturen) as M. neoaurum SBUG 109, N. cyriacigeorgica SBUG 1472, R. ruber SBUG 82. These bacterial and yeast strains were shown to possess high potential for degrading and transforming pristane, iso-pentylbenzene and sec-octylbenzene. The intermediates produced by these bacteria during incubation with pristane were analyzed by GC and GC/MS. The products 4-methyl pentanoic acid; methyl butanedioic acid; 2-methyl pentadioic acid; methyl propanedioic acid; 4-methyl heptanedioic acid and 2,6,10,14–tetramethyl-pentadecan–3–one were detected in M. neoaurum cultures. In R. ruber, methyl butanedioic acid; 2-methyl pentadioic acid; 4,8-dimethylnonanoic acid, 4-methyl heptanedioic acid; 2,6,10–trimethylundecanoic acid; 3,7-dimethyl decanedioic acid and 2,6,10,14–tetramethyl–pentadecan–3-one were identified. In N. cyriacigeorgica, 2-methylpentanedioic acid; 4,8-dimethylnonanedioic acid; 2,6-dimethylheptanedioic acid and pristanic acid were found. The detection of 11 intermediates during pristane degradation by the three Gram-positive bacteria provided sufficient information to elucidate in detail three degradative pathways of pristane involving mono-, di- and sub-terminal oxidations. The sub-terminal oxidation by M. neoaurum and R. ruber was demonstrated for the first time. This occurence of a sub-terminal oxidation in these strains was strengthened by further results of aromatic compounds transformation (see below). During this pathway, ketone mono-oxygenation reactions seem to be involved. Because of this it will be of interest to look more closely at the catalytic processes involved and their possible extension to the bio-degradation of other branched chain hydrocarbons. Since in the present study 59 %, 51 % and 84 % of pristane were degraded in 3 weeks by M. neoaurum, R. ruber and N. cyriacigeorgica, this illustrated that the degradation rates of this isoprenoid alkane were high. The bacteria we studied were not only effective degraders of multiple branched chain alkane but also useful transformers of aromatic hydrocarbons. The intermediates produced were analyzed by comparing the retention times and UV/Vis spectra of the HPLC elution profile as well as the retention times and mass spectra of the GC/MS with those of available standards. Using iso-pentylbenzene as a substrate, 8 metabolites were generated by M. neoaurum transformation including product A (phenylacetic acid), B (acetophenone), D (iso-valerophenone), E (succinic acid), F (benzoic acid), G [(2-hydroxy-phenyl)-acetic acid] and H (2-methyl-4-phenyl-butyric acid). We additionally identified an alkyl hydroxylated iso-pentylbenzene derivative as 2-methyl-4-phenyl-butan-2-ol or 2-methyl-4-phenyl-butan-1-ol. Two metabolites (C and D) were detected by N. cyriacigeorgica transformation and three metabolites (A, D and F) were identified by R. ruber transformation which led to the complete biotransformation of this substance. iso-Pentylbenzene transformation by M. neoaurum was initiated by attack on the alkyl side chain followed by ring cleavage. The appearance of iso-valeorophenone confirmed the occurrence of a sub-terminal oxidation mechanism in M. neoaurum and R. ruber. In addition to products A, C, D and G, the identification X-(3–methyl–butyl)-phenol (X means that position of the hydroxy group on the aromatic ring system, such as 2, 3 or 4 remained unclear) in T. mucoides cultivation demonstrated for the first time the capacity of alkyl side chain attack by this organism which was hitherto known only for its ability of ring cleavage. The detection of 15 degradation products of sec-octylbenzene (including 2-phenylpropionic acid, 3-phenylbutyric acid, ß-methylcinnamic acid, 5-phenylhexanoic acid, acetophenone, 2-hydroxy-acetophenone, 2,3-dihydroxy-benzoic acid, succinic acid, 7-phenyloctan-2-one, benzoic acid, phenylacetic acid, 7-phenyl-octan-2-ol, hydroxy-phenylacetic acid and 2-hydroxybenzoic acid), in the studied bacteria pointed to an effective sec-octylbenzene degradation pathway in which dehydrogenation of 3-phenylbutyric acid to form ß-methylcinnamic acid is a newly described option. The identification of 2-phenylpropionic acid and 3-phenylbutyric acid in sec-octylbenzene transformation experiments by T. mucoides confirmed the possibility of alkyl side chain attack by this yeast. Summarizing the results, we describe for the first time in detail the biotransformation of sec-octylbenzene by M. neoaurum, N. cyriacigeorgica, R. ruber and T. mucoides. Our results suggest that these microorganisms may be useful as potential strains for hydrocarbon degradation and it may be of interest to investigate their suitability to solve specific environmental pollutant problems associated with branched chain aliphatic and alkyl-branched compounds which contribute to the persistence of hydrocarbon fractions in the environment.
Streptococcus pneumoniae (pneumococci), a human pathobiont, express and expose several proteinaceous colonization and virulence factors on its surface to facilitate on the one hand colonization of the upper respiratory tract and on the other hand pathogenesis in the host. In this study the interaction of two of such factors referred to as pneumococcal virulence factor A (PavA) and pneumococcal virulence factor B (PavB) and acting as microbial surface components recognizing adhesive matrix molecules (MSCRAMMs), was delineated with the two host matricellular proteins fibronectin (Fn) and vitronectin (Vn). Despite similarity in nomenclature, PavA and PavB represent two diverse pneumococcal proteins with respect to their structure and association with the pneumococcal surface. PavA is a non-classical surface protein (NCSP) with an ambiguous mode of secretion and anchorage while PavB is a characteristic MSCRAMM, anchored via sortase A to pneumococcal peptidoglycan. PavB has a signature of repetitive modules termed as streptococcal surface repeats (SSURE). Pneumococci preferentially interact with immobilized human Fn. In vitro cell culture adherence assays demonstrated that cell bound Fn facilitates the adherence of pneumococci to the host cells and this particular interaction is indifferent to host cell type and is species non-specific. Flow cytometry and immunoblot analyses further indicated the ability of pneumococci to interact with the soluble form of Fn in a dose-dependent but species non-specific manner. The molecular interaction of PavA and PavB (via its SSURE domains) with Fn was delineated further in detail via several direct protein-protein interaction approaches. Ligand overlay assays, surface plasmon resonance studies and SPOT peptide arrays demonstrated that PavA and PavB target at least 13 out of the 15 type III fibronectin domains located in the C-terminal part of Fn. Strikingly, both pneumococcal fibronectin-binding proteins (FnBPs) recognize similar peptides in targeted type III repeats. Structural comparisons revealed that the targeted type III epitopes cluster on the inner strands of both β-sheets forming the fibronectin domains. Importantly, synthetic peptides of FnIII1, FnIII5 or FnIII15 bind directly to FnBPs PavA and PavB, respectively. Thus, analysis of interaction of pneumococcal FnBPs PavA and PavB revealed a probable conserved and/or common pattern of molecular interaction with human Fn. In addition to Fn, pneumococcal PavB interacts with other host matricellular proteins such as human plasminogen (Plg) and human thrombospondin-1 (hTSP-1). Pneumococcal proteins such as PspC and PspC-like Hic have earlier been demonstrated to interact with hTSP-1 as well as human Vn, thereby depicting a redundant function as MSCRAMMs. In this study the role of PavB as a pneumococcal vitronectin binding protein (VnBP) was assessed. Flow cytometric analysis suggested PavB as VnBP, because strains deficient for PavB exhibited a significantly decreased ability to acquire vitronectin compared to wild-type pneumococci. When using a double knockout, deficient in expression of PavB and the VnBP PspC, the pneumococcal interaction with vitronectin was completely abolished. The direct protein-protein interaction assays such as far western ligand overlay, ELISA, and surface plasmon resonance indicated the interaction of SSURE domains with both soluble and immobilized Vn. However, the binding activity depends on the number of SSURE domains with five SSURE showing the highest binding activity to Vn. The interaction of PavB with Vn was charge dependent and heparin sensitive as analyzed by ELISA. The importance of the heparin binding domains of Vn in this interaction was further analyzed via direct protein-protein interaction approaches. Binding studies (far western ligand overlay, ELISA, and surface plasmon resonance) with truncated recombinant Vn fragments indicated that PavB targets the C-terminal heparin-binding domain (HBD3) of vitronectin, a characteristic shared with PspC, hence, suggesting a conserved molecular interaction of pneumococci with Vn. In addition to its function as an MSCRAMM, PavB has the capability to interact directly with host epithelial cells via an unknown cellular receptor. Thus, this study aimed to identify cellular receptor(s) for PavB. In vitro cell culture adherence and invasion assays confirmed that pneumococcal PavB is involved in promoting pneumococcal adherence to respiratory epithelial cells without employing any molecular bridge. The direct interaction between PavB and host epithelial cells was further confirmed via direct binding assays when using Cy5-labeled PavB and flow cytometric analysis. Strikingly, exogenously added human vitronectin competitively inhibited binding of PavB to respiratory epithelial cells. This observation led us to hypothesize that the major vitronectin receptor αvβ3 integrin acts as a potential receptor for PavB. This hypothesis was supported by functional blocking assays with monoclonal antibodies recognizing specific integrin subunits. The results revealed reduced binding of PavB in the presence of bound antibodies recognizing αv integrin indicating that PavB employs αvβ3 integrin as its direct receptor on eukaryotic cells. This was further confirmed via a direct binding assay of PavB to mouse embryonic fibroblasts (MEFs) where cells lacking αvβ3 demonstrated a marked decrease in binding to PavB. Although functional blocking assay and direct binding assay with MEFs supported the role of αvβ3 integrin as a direct adhesin for PavB, RNA interference of αv integrin in epithelial cells did not impair the binding of PavB in αv-knocked down cells in comparison to non-transfected cells. Finally, surface plasmon resonance (SPR) analysis indicated the direct interaction between pneumococcal PavB and recombinant αvβ3 integrin. In this study we report for the first time the interaction of a Gram-positive extracellular pathogen, namely Streptococcus pneumoniae, with one of the host ICAMs, namely the αvβ3 integrin. In conclusion, the present study analysed some of the aspects of molecular interaction of pneumococcal MSCRAMMs PavA and PavB with hFn and hVn. The hot spots of interaction on C-terminal FnIII repeats were delineated for PavA and PavB. HBD3 was revealed to be pivotal for PavB-Vn interaction. In addition the redundant role of pneumococcal PavB as an MSCRAMM was demonstrated. Furthermore this study successfully identifies a direct receptor for pneumococcal PavB, namely αvβ3 integrin. The mechanism and biological rationale of this newly identified interaction is a matter of debate and awaits further scientific analyses.
Literature shows that people with a migration background (PwM) with dementia are an especially vulnerable group. Data on the number of PwM with dementia in Germany is scarce meaning the healthcare system faces a challenge of an unknown magnitude. They are mostly not part of the healthcare landscape and lack knowledge about dementia and healthcare services. Healthcare professionals and services do not seem to be culturally sensitive enough and not adequately equipped to take care of PwM with dementia. Therefore, this work focuses on a) estimating the number of PwM with dementia broken down by country of origin and federal state; b) exploring the caregiving experience, barriers of healthcare utilisation and measures to increase utilisation; and c) determining the scope of culturally sensitive information and healthcare services as well as projects on dementia and migration in Germany. A combination of quantitative and qualitative research methods as well as a scoping review are applied to examine the research focus.
Calculations show that an estimated 96,500 PwM have dementia, presumably mostly originating from Poland, Italy, Turkey, Romania, and the Russian Federation. The majority of affected PwM live in North Rhine-Westphalia, Baden-Württemberg, and Bavaria. Family members experience similar challenges and consequences as non-migrants in the care of a person with dementia. PwM lack sufficient knowledge of dementia and information regarding the available healthcare services. These are only two of the reasons why the healthcare system is not utilised. To increase utilisation, services should be culturally sensitive and information easily accessible. In addition, easier navigation and the expansion of existing healthcare structures is needed. The scoping review identified 48 culturally sensitive healthcare and information services and projects for PwM with dementia. The majority are located in North Rhine-Westphalia, Baden-Württemberg, Bavaria, and Hesse, which mirrors the distribution of PwM with dementia in Germany. For the most part, these services offer counselling in different languages. These results confirm that PwM (with dementia) and healthcare professionals need in-depth education on this topic. There should be a focus on the design of information and healthcare services that are tailored in a culturally sensitive way. This dissertation further indicates that culturally sensitive healthcare services, personalised for individual situations on site, should be expanded and also facilitated by not only healthcare professionals and service providers but also by law- and decision-makers. Furthermore, there is a need for cooperation between researchers, healthcare professionals, service providers, healthcare systems, law-makers, and other stakeholders in the field on a national and an international level.