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Klimawandel, Änderungen der Landnutzung und Habitatzerstörung sowie die Globalisierung tragen zu einer zunehmenden Ausbreitung von bekannten und noch unbekannten Viren bei, die eine Gefahr für Mensch und Tier darstellen können. Um potenziell gefährliche Viren frühzeitig zu entdecken, kann das in dieser Arbeit vorgestellte Protokoll für einen pan-viralen DNA-Microarray-gestützten (PVM) Virusnachweis verwendet werden, der optional mit einer Hochdurchsatzsequenzierung gekoppelt werden kann.
Für die Etablierung des PVM-Protokolls wurde die Leistungsfähigkeit von drei Probenbearbeitungs- und Datenauswertungsmethoden beim Nachweis von zwei Modellviren, einem DNA-Virus und einem RNA-Virus, verglichen. Für die Kopplung mit dem PVM wurden verschiedene Systeme für die Hochdurchsatzsequenzierung verwendet.
Das Ziel der Arbeit war die Etablierung eines optimierten PVM-Protokolls für einen robusten, breiten Virusnachweis, welcher einzeln oder in Kombination mit einer Hochdurchsatzsequenzierung als Teil einer mehrstufigen Analysepipeline verwendet werden kann.
Beim Nachweis beider Modellviren wies die Library-basierte Probenbearbeitungs- und Datenauswertungsmethode Limma die höchste Sensitivität auf. In der darauf folgenden Validierung konnten alle Viren, unabhängig von ihrer Genomorganisation und Komplexität der Probenmaterialien, korrekt identifiziert werden. In zwei publizierten Studien konnte der Nachweis der zum Zeitpunkt der Untersuchung noch unbekannten BBLV und SqAdV-1 gezeigt werden. Durch die Rückgewinnung von Virus-spezifischen Nukleinsäuren vom PVM und der anschließenden Sequenzierung
mittels Hochdurchsatzsequenzierung konnte das SqAdV-1 im Rahmen einer mehrstufigen Analysepipeline vollständig identifiziert, annotiert und taxonomisch eingeordnet werden. Durch die Kombination von PVM und Hochdurchsatzsequenzierung wurden für sechs Viren eine Virus-spezifische Anreicherung und ein damit verbundener Gewinn an Sequenzinformation erreicht. Die Library-basierte Probenbearbeitung mit Limma erlaubte einen robusten und sensitiven Virusnachweis; deshalb wurden beide Methoden für das PVM-Protokoll ausgewählt. Die Fähigkeit des hier etablierten PVM-Protokolls, Viren unabhängig von der Genomorganisation und in komplexen Probenmaterialien zu identifizieren, zeigt dessen Gleichwertigkeit mit bereits etablierten PVM-Systemen. Die Verwendung des PVM-Protokolls in einer mehrstufigen Analysepipeline erlaubt auch die Identifikation von bisher unbekannten Viren. Der durch die Kombination mit einer Hochdurchsatzsequenzierung erreichte Gewinn an Sequenzinformation ermöglicht eine Identifizierung und detailliertere Charakterisierung von Viren.
Der PVM stellt einzeln und in Verbindung mit einem Hochdurchsatzsequenzierungs- System ein wertvolles Werkzeug für die Virusdiagnostik dar, dessen Anwendung den Zeitaufwand für die Virusidentifizierung deutlich reduzieren kann.
The Spider Anatomy Ontology (SPD)—A Versatile Tool to Link Anatomy with Cross-Disciplinary Data
(2019)
Die Ergebnisse dieser Arbeit sollen dazu dienen, das Tragen eines Maulkorbs bei Diensthunden als möglichen Stressor zu analysieren und das Verhalten von Passanten auf Maulkorb tragende Hunde weiter zu erforschen.
123 Diensthunde wurden dafür in drei verschiedenen Situationen (Ablage (N=103), Stadtspaziergang (N=51) und Schutzdienst (N=35)) untersucht. Hierzu wurden das Ausdrucksverhalten und die Cortisolwerte videografiert und gemessen. Die Situatio-nen wurden jeweils einmal ohne und einmal mit Maulkorb durchgeführt, um gegebenenfalls eine Veränderung im Verhalten oder in den Cortisolwerten der Hunde durch den Maulkorb zu erkennen. Die Cortisolproben wurden vor der Situation im oder am Auto von den Diensthunden von den jeweiligen Hundeführern entnommen. 10-15 Minuten nach der Situation wurde die zweite Speichelprobe entnommen. Die Speichel-Cortisolwerte vorher und nachher dienten dem Vergleich und der Beurteilung, ob der Maulkorb einen Einfluss auf die Cortisolwerte hatte. Ausgewertet wurden die Proben mit Hilfe eines Enzymimmunoassays in Wien.
Während des Stadtspaziergangs wurde das Verhalten der Passanten auf die Hunde videografiert und ausgewertet. Auch hierbei wurde der Vergleich im Verhalten der Menschen auf die Diensthunde „ohne Maulkorb“ (N=1010) und „mit Maulkorb“ (N=1011) angestellt.
Die Fragestellungen dieser Arbeit waren:
• Zeigt der Diensthund in drei unterschiedlichen Übungssituationen durch das Tragen des Maulkorbes andere Verhaltensweisen als ohne Maulkorb?
• Steigt der Pegel des Stresshormons Cortisol beim Diensthund durch das Tragen des Maulkorbes in drei unterschiedlichen Übungssituationen im Vergleich zu den gleichen Situationen ohne Maulkorb an?
• Sind die Reaktionen von Passanten auf einen maulkorbtragenden Hund anders, als auf einen Hund ohne Maulkorb?
In dieser Studie konnte in keiner der drei Situationen ein Anstieg der Cortisolwerte bei den Hunden durch das Tragen des Maulkorbes festgestellt werden. Bei den Ver-haltensbeobachtungen konnten hingegen Unterschiede erkannt werden. Die Ohr- und Rutenhaltung wurden während des Stadtspaziergangs mit Maulkorb häufiger in einer defensiveren und submissiveren Stimmungslage getragen. Zusätzlich wurde ohne Maulkorb mehr gewedelt und geschnüffelt.
Der Einsatz des Maulkorbes bei der Polizei erzeugt nach dieser Studie bei Dienst-hunden keinen zusätzlichen Stress und stellt vielfach ein unersetzliches Hilfsmittel dar. Auch bei der Verwendung im Privathundebereich ist der Maulkorb deshalb mit hoher Wahrscheinlichkeit ein gutes Hilfsmittel, das der Hund, bei guter Gewöhnung und für einen begrenzten Zeitraum, ohne gesundheitliche Bedenken tragen kann.
Das Verhalten der Passanten auf die Hunde unterschied sich nur in dem Verhalten „keine Reaktion“. Auf Hunde ohne Maulkorb wurde häufiger nicht reagiert. Ein Anzeichen für erhöhte Furcht oder Wachsamkeit bei einem potentiell gefährlichen Hund mit Maulkorb, wie es in der Studie von Racca & Baudoin (2009) festgestellt wurde, konnte nicht beobachtet werden.
Der Vergleich von den in dieser Arbeit gewonnenen Erkenntnissen mit anderen Studien, ist fast nur in dem Bereich der Stressforschung beim Hund möglich. Arbeiten über die Auswirkungen des Maulkorbes auf das Verhalten von Hunden oder Passanten sind bisher kaum durchgeführt worden. Diese Arbeit bietet in diesem Bereich einen bisher einzigartigen Ansatz und konnte darüber hinaus mit einer großen Anzahl von Hunden durchgeführt werden.
Die vorgelegte Studie wurde auch im Hinblick auf Tierschutzaspekte durchgeführt und diskutiert. Es ist zu berücksichtigen, dass für die hier getesteten Situationen nur ein kurzes Tragen des Maulkorbes vom Hund notwendig war. Die Vielfältigkeit der unterschiedlichen Ausbildungsmethoden in den Polizeidienststellen und auch die vielfältigen Persönlichkeiten von Hunden und Hundeführern machen die Arbeit so anwendungsrelevant. Gerade auch die unterschiedliche Gewöhnung und Gewöhnungszeit an den Maulkorb, spiegelt die Realität im Umgang mit diesem Hilfsmittel wider und bietet, durch die große Zahl an teilgenommenen Hunden, trotzdem aussagekräftige Ergebnisse.
In einer parallel durchgeführten Studie von I. Spitzley werden das Verhalten und die Cortisolwerte von Haushunden während eines 45 minütigen Freilaufs, jeweils Hunde mit und ohne Maulkorb, ausgewertet und analysiert.
The present work focusses on the mosquito populations of two zoological gardens in Germany with the aim to better understand mosquito biology of native species and to contribute to a greater awareness of mosquito and mosquito-borne disease agent surveillance in zoos. For this purpose, data on species composition, blood meal patterns and mosquito-borne pathogens were analysed. The investigated zoological gardens differed not only in their sizes and animal stocks, but also in their surrounding environments. The 160 ha Tierpark Berlin is located in a densely populated urban area, while the 15 ha Zoological Garden Eberswalde is surrounded by forest.
To gain an overview about the mosquito fauna of both zoos, adult specimens were caught by aspirating and EVS-trapping during the 2016 season. In addition, larval stages were collected from their breeding sites located in the zoo areas. In total, 2,257 mosquitoes were sampled, belonging to 20 taxa. Seasonal differences between the zoos were documented, both in terms of species composition and the relative abundance of mosquito species collected. As the studied zoos were located in the same climatic region and both locations provided similar breeding sites, differences in species composition were attributed to the entry of mosquitoes from surrounding landscapes. Influencing factors could have been the different sizes of the zoos and variations in the potential host animal populations.
According to the vector potential of most frequently collected taxa in the Zoological Garden Eberswalde (Annulipes Group, Culiseta annulata), TAHV, USUV, WNV, filariae and avian malaria parasites appear to have the highest risk of being transmitted at this location. In the Tierpark Berlin, Aedes vexans was the most frequently collected mosquito species, suggesting a theoretical risk for the transmission of a broader spectrum of pathogens due to covered vector competences. Pathogens such as BATV, SINV, TAHV, USUV and filarial worms could be of major importance regarding transmission risk to zoo animals, as they had previously been found to circulate Germany. In addition, avian malaria parasites represent a considerable risk for susceptible exotic bird species in Berlin.
Since the blood-feeding behaviour of vector-competent mosquito species has a major influence on the transmission of a mosquito-associated pathogen, the analysis of blood meal patterns is crucial to better understand vector-pathogen cycles. Therefore, blood meals of blood-fed mosquitoes caught in 2016 and 2017 by aspirating and EVS-trapping in the Tierpark Berlin and the Zoological Garden Eberswalde were analysed. The aim was to investigate to what extent native mosquito species accept exotic zoo animals, wild native animals and humans as blood hosts. In addition, it was examined whether the collected species are generalists or specialists when selecting vertebrates for blood feeding.
A total of 405 blood-fed mosquitoes from 16 taxa were collected. The genetic analysis of blood meals identified 56 host species, which – in addition to humans – mainly originated from mammals of the zoo animal populations. In agreement with the previous study on the mosquito fauna of the Tierpark Berlin and the Zoological Garden Eberswalde, the analysis of blood meals also showed differences between the two zoos. In the smaller Zoological Garden Eberswalde, a higher number of blood-fed mosquitoes was collected than in the Tierpark Berlin, probably caused by a higher host density in Eberswalde, which may have led to an overall higher mosquito density. However, no differences between both zoos were observed with respect to the blood feeding behaviour of the analysed mosquito species: Mosquitoes of both locations were rather generalistic, although species could be grouped according their blood meals into 'amphibian', 'non-human mammal' and, ‘non-human mammal and human' feeding species. The more random selection of hosts could indicate a low probability of effective pathogen transmission by applying the 'dilution effect'. Notwithstanding, since wild animals have also been accepted as hosts, pathogen transmission by bridge vectors from one vertebrate group to another could be relevant in the sampled zoos.
Adult mosquito specimens collected in 2016 and 2017 were screened for filarial nematodes, avian Haemosporidia and mosquito-borne viruses. Dirofilaria repens was detected in a mosquito from the Zoological Garden Eberswalde. Mosquitoes from Berlin and Eberswalde were tested positive for the nematode species S. tundra. Sindbis virus was found in a mosquito pool collected in the Tierpark Berlin, while no mosquito-associated viruses were detected in specimens collected in the Zoological Garden Eberswalde. Mosquitoes from both zoos were positive for the haemosporidian parasites Haemoproteus sp. and Leucocytozoon sp., and one documentation was made for avian Plasmodium sp. in the Tierpark Berlin.
The identified pathogens have the potential to cause disease in captive and wild animals, and some of them also in humans. Most of the mosquitoes tested positive had been collected in July, suggesting a high infection risk during this month. Since most pathogen detections were made from species belonging to the Cx. pipiens complex, species of this complex seem to be most relevant in the studied zoos when it comes to mosquito-borne pathogen transmission. Although mosquitoes are no proven vectors of most of the avian malaria parasite genera found, evidence for Haemoproteus sp. and Leucozytozoon sp. demonstrated a high prevalence of avian malaria parasites in the zoos.
In summary, the results of the three studies indicate regional differences both in the mosquito species composition and in the occurrence of mosquito-borne pathogens. However, no differences were found between the mosquito communities of both zoos concerning their blood feeding behaviour, suggesting that the general behaviour of the insects is location-independent.
Several potential disease agents were found in the collected mosquitoes, although not at high abundances. Whether these pathogens were found by chance in the two zoos or whether the particular zoo environment is a hot spot of arthropod-borne pathogens cannot be determined with the studies conducted. Nonetheless, it seems clear that zoological gardens are attractive to mosquito females not only in their search for breeding sites, but also when looking for blood hosts and places for mating or resting. These advantageous conditions also attract mosquito species that have their larval habitats outside the zoological gardens, which is why elimination of breeding sites on the zoo premises alone will not necessarily keep away all mosquitoes.
A closer collaboration between zoological gardens and entomologists could be beneficial for both. Zoo officials could benefit from being able to identify potential arthropod vectors on the zoo grounds and receiving information on circulating arthropod-borne disease agents, as well as on the animal species susceptible to those. For entomologists, zoological gardens are ideal research locations, as they provide an environment with a high diversity of habitats and potential blood hosts for haematophagous arthropods in a confined space.
Studying mosquito biology will become even more significant in the future, since in a world that is getting smaller, both potential vectors and pathogens are regularly introduced into areas where they did not occur before. Therefore, it would be desirable if more studies targeting ecological as well as infectiological aspects of vector species in zoological gardens in Germany were carried out.
For decades, evolutionary biologists have sought to understand the evolution of individual behaviour, physiology and ecology allowing organisms to cope to environmental change. One of the main challenges of current climate change is the unprecedent rate of temperature increase, as well as the increased occurence of extreme heat events. Interindividual response variability opens a whole new area of opportunities to understand how individual phenotypic traits are linked to individual response differences. In colour polymorphic species, colour honestly reflects an individual’s life-history strategy, and each morph may, therefore, represent an alternative life-history strategy. As such, colour polymorphic species, such as the Gouldian finch (Erythrura gouldiae), may be good models to assess how different strategies between morphs are linked to their espective responses to environmental variations. However, polymorphic species have mainly been disregarded for that purpose. In this context, the main aim of this thesis was to understand how the two morphs of the Gouldian finch respond through phenotypic plasticity to simulated heatwaves reaching thermocritical temperatures, and whether such differential responses may help to identify a ‘winner’ and a ‘loser’ morph in the light of climate change. To address these issues, we used an integrative approach including measurements of behavioural (Study 1), physiological (Study 2), and reproductive (Study 3) parameters. The novelty of our approach was to assess the immediate behavioural and physiological response variation of individuals of the two morphs longitudinally across different thermal conditions, as well as the postponed effects of this thermocritical heatwave exposure on their reproductive performance. In this study, although the behavioural responses generally did not differ between morphs or according to temperature intensity, the physiological and reproductive parameters differed in response to morph and temperature intensity. Blackheaded females, in particular, seem highly sensitive to thermocritical heatwaves, as they exhibited decreased body mass and increased oxidative damage during the thermocritical heatwaves, and advanced breeding initiation after these conditions, whereas these variables remained mostly unaffected in black-headed males and red-headed individuals. However, despite some response differences between morphs, both invested similarly in reproduction following intense heatwaves, and the offspring of both morphs were similarly affected. Based on these results, no morph therefore seems to appear more disadvantaged than the other following an intense heatwave, and red- and black-headed Gouldian finches may both be considered as climate stress ‘losers’.
Species persistence in the face of rapidly progressing environmental change requires adaptive responses that allow organisms to either cope with the novel conditions in their habitat or to follow their environmental niche in space. A poleward range shift due to global warming induced habitat loss in the south has been predicted for the lesser horseshoe bat, Rhinolophus hipposideros. Theoretical as well as numerous empirical studies link range expansion success to increased dispersal and reproduction rates due to spatial sorting and r-selection resulting from low population densities at the expansion front. R. hipposideros females however are highly philopatric and the species’ life history reflects a K- rather than an r-strategy, encompassing a long life span and limited individual annual reproductive output. I therefore investigated if adaptations in these traits determining range expansion success (dispersal and reproduction) can be observed in this bat species of high conservation concern. Genetic diversity presents a critical factor for adaptive responses to global change, both for range expansion and for coping with novel environmental conditions. I hence explored the genetic diversity levels of European R. hipposideros leading edge populations and their drivers for an assessment of these populations’ evolutionary potential and the development of conservation recommendations.
Comparing range expansion traits between an expanding R. hipposideros metapopulation in Germany and a non-expanding one in France revealed that range expansion was associated with an increase in juvenile survival and fecundity, and no decrease in adult survival. These results demonstrate than an increase in reproduction and growth rates is generally possible in R. hipposideros, indicating a potential adaptation (sensu lato) to range expansion. A positive correlation between adult and juvenile survival in the expanding metapopulation suggests higher resource acquisition in the expanding metapopulation, giving rise to the question if the observed demographic changes have a genetic basis or if they are rather induced by differences in environmental conditions between the two metapopulations. Long-term range expansion success requires adaptive evolutionary changes. The relative contribution of the former and that of undirected changes resulting e.g. from differences in resource availability therefore will have to be investigated in more detail in the future to allow predictions about range expansion dynamics in R. hipposideros.
The number of individuals within a radius of approximately 60 to 90 km around a population (as a measure of connectivity) was identified as the main positive driver of the studied populations’ genetic diversity. Overall genetic diversity levels in German R. hipposideros populations were found to be reduced compared to populations in France as a legacy of demographic bottlenecks resulting from severe population declines in the mid-20th century. This finding is alarming as future range expansion can be expected to entail a further decrease in genetic diversity. The resulting loss of genetic diversity can be expected to be particularly strong in R. hipposideros due to the detected dependence of genetic diversity on connectivity, because range expansion often results in small and patchy populations.
Protecting and ideally re-installing genetic diversity in R. hipposideros leading edge populations therefore presents a conservation goal of utmost importance. To achieve this endeavour, conservation efforts should target the protection of extensive networks of well-connected populations. Geographical concentration of individuals should be avoided and populations in key locations that connect clusters must be protected particularly well to prevent populations from becoming isolated. Continuous, regular monitoring of population trends is also important for a quick registration of disturbances or threats, and the subsequent rapid development of countermeasures to preclude further demographic declines.
The reduced levels of genetic diversity in the German metapopulation precluded a reliable quantification of dispersal rates due to the reduced power of discrimination between individuals. While ongoing re-colonization and the establishment of new maternity colonies provide evidence for increased dispersal in the expanding metapopulation, evaluating the expected range expansion velocity of R. hipposideros in relation to the estimated velocity of global warming induced habitat loss will require the confirmation of the existing preliminary dispersal data by employing more genetic markers.