Doctoral Thesis
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As the effects of anthropogenic climate change become more pronounced, it is critical to understand if and how species can persist in novel environments. Range-expanding species provide a natural experiment to study this topic: by studying the factors contributing to successful colonization of new habitats, we can gain insight into what influences organisms’ adaptive potential. The wasp spider, Argiope bruennichi, has expanded its range from warm, oceanic and Mediterranean climate zones (populations in this region are referred to as “ancestral” or “core”) into a new thermal niche, the continental climate of the Baltic States and Scandinavia (referred to as “expanding” or “edge”) within the last century. Past work demonstrated that the expanding populations are European in origin, but are more diverse than the ancestral populations, due to genetic admixture. This discovery led to the following questions, which are investigated in this dissertation: (i) Was the successful colonization of colder, more continental northern climates due to phenotypic plasticity or genetic adaptation? (ii) If A. bruennichi’s establishment of northern latitudes can be attributed to genetic adaptation, did selection act on standing genetic variation, on genetic variation introduced via admixture/introgression, on specific genomic regions, or on novel mutations? (iii) Is there a role of the microbiome in the A. bruennichi range expansion?
In Chapter 1, we assembled a chromosome-level genome for the species: the first such high-quality genome for a spider, which we made use of as a resource to provide the genomic context of single nucleotide polymorphisms in our primary study on genetic adaptation and phenotypic plasticity (Chapter 3). The genome assembly also opened the door to many new projects, such as the study presented in Chapter 2. In Chapter 2, the chromosome-level resolution of our assembly allowed us to identify the sex chromosomes in A. bruennichi. Due to the X1X20 sex chromosome system, where males have one copy of two X chromosomes, and females have two copies, the X chromosomes have a lower effective population size, and lower recombination rate, than autosomes. These characteristics give rise to the theoretical prediction of increased evolutionary rates in sex chromosomes. Knowing the identity of the sex chromosomes in our A. bruennichi genome assembly will allow us to test if there is stronger differentiation between populations on the X chromosomes.
Chapter 3 represents the central study of this dissertation. We performed a reciprocal transplant common garden experiment to assess plasticity and adaptation in cold tolerance traits, using spiderlings from the core of the range in France, and the edge of the range in Estonia. We combined this with data on clinal variation in adult phenotypes (body size, pigmentation, and fecundity) and genotypes in a transect across the European range. This study revealed a strong signature of genetic adaptation for increased cold tolerance in edge populations, and clear genetic differentiation of ancestral and expanding populations over a very short geographic distance, despite gene flow. We provide genome-wide evidence for adaptive introgression, and conclude that the A. bruennichi range
expansion was enabled by adaptive introgression, but has reached a poleward range limit.
Interactions with microbes shape all aspects of eukaryotic life. Endosymbiotic bacteria have been shown to alter the thermal tolerance of arthropod hosts, and influence dispersal behavior in spiders. With this background, in Chapter 4, we asked whether the microbiome might play a role in the rapid range expansion of A. bruennichi. We characterized the microbiome in various dissected tissues of spiders from two populations. Although we found no obvious differences between populations or tissues, this study yielded the discovery of a novel, dominant, vertically transmitted symbiont with astoundingly low similarity to all other sequenced bacteria. Since that discovery, we have found evidence of the unknown symbiont in A. bruennichi populations across the Palearctic (unpublished data), making it relatively unlikely to play a role in the range expansion.
By studying the establishment and subsequent differentiation of core versus edge populations of A. bruennichi following range expansion, we were able to gain insight into the evolutionary and ecological processes that allowed this species to successfully cope with novel environments. The rapidity with which local adaptation arose in A. bruennichi suggests that evolutionary adaptation to novel environments is possible over short time periods. However, this may only be possible in species with sufficient standing genetic variation, or with genetic variation introduced via admixture, as in A. bruennichi, which has important implications for our understanding of species responses in the face of ongoing global climate change.