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This work investigates turbulence in the core plasma of the optimised stellarator
Wendelstein 7-X. It focuses on experimental characterisation and
evaluation of the electrostatic micro-instabilities, which drive turbulent fluctuations,
and the saturation of turbulence by zonal flows. Expectations for
Wendelstein 7-X are formulated by reviewing theoretical work and with
the help of gyrokinetic simulations. The experimental analysis centres on
line-integrated density fluctuation measurements with the phase contrast
imagining diagnostic in electron cyclotron heated hydrogen discharges. An
absolute amplitude calibration was implemented, and a method for reliable
determination of dominant phase velocities in wavenumber-frequency
spectra of density fluctuations has been developed. Line-averaged density
fluctuation levels are observed to vary between magnetic configurations.
The wavenumber spectra exhibit a dual cascade structure, indicating fully
developed turbulence. The dominant instability driving turbulent density
fluctuations on transport relevant scales is identified as ion-temperaturegradient-
driven modes, which are mainly localised in the edge region of the
confined plasma. Despite the line-integrated nature of the measurement, the
localisation of density fluctuations is shown by comparing their dominant
phase velocity with the radial profile of the E × B rotation velocity due to
the ambipolar neoclassical electric field. Nonlinear gyrokinetic simulations
and a simplified plasma rotation model within a synthetic diagnostic confirm
the localisation. Oscillations of the dominant phase velocity indicate
the existence of zonal flows as a saturation mechanism of ion-temperaturegradient-
driven turbulence. A direct effect on turbulent density fluctuation
amplitudes and radial transport is observed.
The layer-by-layer method is a robust way of surface functionalization using a wide range of materials, e.g. synthetic and natural polyelectrolytes (PEs), proteins and nanoparticles. Thus, this method yields films with applications in diverse areas including biology and medicine. Sequential adsorption of different oppositely charged macromolecules can be used to prepare tailored films with controlled molecular organization. In biomedical research, electrically conductive coatings are of interest. In manuscript 1, we investigated films sequentially assembled from the polycation poly (diallyldimethyl-ammonium) (PDADMA) and modified carbon nanotubes (CNTs), with CNTs serving as the electrically conductive material. We assume that charge transport occurs through CNT contacts. We showed that with more than four CNT/PDADMA bilayers, the electrical conductivity is constant and independent of the number of CNT/PDADMA bilayers. A conductivity up to 4∙10^3 S/m was found. It is possible to control the conductivity with the CNT concentration of the CNT deposition suspension. A higher CNT concentration resulted in thicker CNT/PDADMA bilayers, but in a lower conductivity per bilayer. We suspect that an increased CNT concentration leads to a rapid CNT adsorption without the possibility to rearrange themselves. If PDADMA then adsorbs on the disordered CNTs in the next deposition step, the average thickness of the polymer layer is thicker than on the more ordered CNT layer from the dilute solution. This leads to an increased PE monomer/CNT ratio and lower conductivity. More polycations between the CNT layers leads to less CNT contacts. Thus, the controlled composition of films can be used to fulfill specific requirements.
For many applications of polyelectrolyte multilayers (PEMs), cheap PEs with a broad distribution of molecular weights are used. It was unknown whether the distribution of molecular weights of the PE in the adsorption solution is maintained during the adsorption process and hence in the film. To investigate this, the PSS adsorption solution in article 2 consisted of a binary mixture of short and long poly (styrene sulfonate) (PSS). A good model system to study layered films in terms of composition are PDADMA/PSS multilayers. Neutron reflectivity and in-situ ellipsometry measurements were carried out to determine the PSS composition in the film and the growth regimes. At a mole fraction of long PSS of 5 % or more in solution, the exponential growth (which is characteristic of short PSS) is totally suppressed, and only long PSS is deposited in the resulting multilayer. Variation of adsorption time of PSS showed that short PSS first adsorbs to the surface but is displaced by long PSS. Between 0 and 5 % of long PSS in the adsorption solution exponential growth occurs. The fraction of short PSS in the film continuously decreases with the increase of long PSS in the adsorption solution. In the assembly of films prepared from binary PSS mixtures, the short PSS leaves the film through adsorption/desorption steps both during PSS adsorption and during PDADMA adsorption (as PDADMA/PSS complexes). Both techniques show that the composition of the film does not correspond to that of the deposition solution. The composition and thus the properties of the resulting multilayer are influenced by the choice of adsorption time. Moreover, we conclude that a multilayer grown from a polydisperse polyelectrolyte contains fewer mobile low molecular weight polymers than the deposition solution.
In manuscript 1 and article 2, the composition of multilayers was studied. In manuscript 1 adsorption kinetics were important for the arrangement of CNTs on the surface. In article 2, the adsorption kinetics, i.e. the diffusion of the polyelectrolytes to the surface, was also investigated. In article 3, we investigated the influence of the composition of the film as well as the preparation condition on the mobility of PEs in the film. The molecular weight of the polycation PDADMA and the NaCl concentration of the deposition solution were varied. The vertical PSS diffusion constant D_PSS within the PDADMA/PSS multilayers was measured using neutron reflectivity. The salt concentration of the preparation solution defines the polymer conformation during deposition. The molecular weight of the polycation determines the degree of intertwining. Together, both parameters determine the polyanion-polycation coupling and thus the PSS mobility within the network. Log−log display of D_PSS vs the molecular weight of PDADMA and fits to two power laws (D_PSS ∝ X_n(PDADMA)^(-m) ∝ M_w(PDADMA)^(-m)) reveals for films built from 10 or 200 mM NaCl a kink. Below and above the kink, the dependence of D_PSS on M_w(PDADMA) can be described by different power laws. For Χ_n(PDADMA) < X_n,kink(PDADMA) ≈ 288, the exponents are consistent with the predictions of the sticky reptation model. X_n(PDADMA) ≈ 288 is the entanglement limit. For Χ_n(PDADMA) > X_n,kink(PDADMA) ≈ 288, the decrease of D_PSS with M_w(PDADMA) is larger than below the entanglement limit, which is indicative of sticky reptation and entanglement. The PSS diffusion constant of films built from 100 mM NaCl drops three orders of magnitude when increasing the molecular weight of PDADMA from 45 kDa to 72 kDa. To figure out if an immobile PSS fraction exists in the film built from 72 kDa PDADMA (beyond the entanglement limit), the film was annealed at different conditions in article 4: both temperature and salt concentration were varied. For data analysis, the simplest model with two PSS fractions with different diffusion constants was used. These diffusion constants increase as the temperature of the surrounding solution is increased. As assumed in article 3, an immobile PSS fraction exists when annealing at room temperature. At higher annealing temperatures, at least two diffusion processes must be distinguished: the diffusion of the highly mobile PSS fraction through the entire film and a slow PSS fraction, mowing in a limited way. The choice of preparation conditions determines whether a polyelectrolyte multilayer can intermix completely. It is not clear if complete intermixing will ever occur for films built with PDADMA beyond the entanglement limit. It is possible that the diffusion is more complex. Long-term measurements will clarify this question. Calculating scattering length density profiles with subdiffusive behavior would be interesting and is a challenge for the future. Furthermore, immobile fractions are only visible with long annealing times. We hypothesize that an immobile or nearly immobile fraction is present whenever the dependence of D_PSS on the molecular weight of PDADMA cannot be described by the sticky reptation. To verify this hypothesis, further studies are necessary.
All results presented and discussed in the manuscript and articles show that by varying the preparation conditions, tailored films can be built. The composition of the film is also determined by the adsorption kinetics. In addition, the mobility of the PEs within the multilayers can be controlled by varying the conformation, mingling and entanglement of the chains within the film. The influence of the salt concentration in the preparation solution on the growth regimes during film formation is part of our future research. It is planned to investigate films built of different PDADMA molecular weights under varied annealing conditions to better understand the mobile and immobile fractions.
Kinetic modeling and infrared spectroscopy of charge carriers across the plasma-wall interface
(2022)
In this thesis, charge transport at the plasma-wall interface is investigated theoretically, on a semiclassical, microscopic level. Based on the Boltzmann and Poisson equations a set of equations is derived and numerically solved to model charge carriers both within a semiconducting wall and a gaseous plasma in front of it. While the plasma is considered collision-free, within the solid, phonon collisions, as well as recombination processes between conduction band electrons and valence band holes are considered. This results, for the first time, in a self-consistent modeling of both the gaseous electron-ion plasma and the electron-hole plasma in the solid on the same footing. Utilizing specific approximations for different physical scenarios, numerical solutions are presented both for the floating and the electronically contacted (biased) interface. In the latter case, the current voltage characteristic is calculated and shown to heavily depend on the charge kinetics within the wall.
Furthermore, we present optical methods to measure the wall charge noninvasively. These utilize the influence of the deposited surplus charges on the optical reflection coefficient of the surface. By calculating the optical response of these charges, we show that the magnitude of the surface charge can be inferred from the change in the reflectivity of the surface caused by the presence of the plasma. While nonlocal effects are considered, it is shown analytically and numerically that these can be neglected at the scales of the considered physical systems.
Cell mechanical properties reveal substantial information on cell state and function. Utilizing mechanics as a label-free biomarker allows for investigation of fundamental cellular processes as well as biomedical applications, e.g., disease diagnosis. High-throughput methods for accessing the elastic properties of cells in suspension from hydrodynamic deformation in a microfluidic constriction are available with real-time analysis rates of up to 1000 cells per second. However, accessing elastic as well as viscous properties of cells and multicellular systems in suspension as well as adhered to surfaces at high throughput has not been possible so far. In this thesis, I approached this question and developed as well as applied microfluidic and holographic technologies to analyze the viscoelastic properties of single cells and multicellular aggregates, respectively.
First, I demonstrated that real-time deformability cytometry (RT-DC) can be applied in transfusion medicine, where the highest quality standards have to be maintained while blood product release is time-critical. We showed for platelet and red blood cell concentrates as well as for hematopoietic stem cells that their mechanical properties can be used for label-free quality assessment. The results have been published in Lab on a Chip (Aurich et al. 2020).
For RT-DC and many other methods based on hydrodynamic deformation, the constriction size has to be adapted to the objects of interest to allow for a shear-induced deformation. We introduced virtual fluidic channels, which are established by two co-flowing aqueous polymer solutions. Virtual fluidic channels can be precisely adjusted in their cross section, allowing for mechanical phenotyping of single cells as well as cell clusters or tissue spheroids in one microfluidic system. Importantly, measurements can also be performed in standard microfluidic geometries beyond soft lithography, e.g., in the cuvette of a flow cytometer. For cell spheroids as a model system for multicellular aggregates, we show a 10-fold lower Young's modulus of the tissue compared to single-cell mechanics, suggesting cell-cell and cell-matrix interactions being potential contributors to the mechanics of multicellular aggregates. Our work on virtual fluidic channels has been published in Nature Communications (Panhwar et al. 2020).
Within this thesis, I expanded the high-throughput elastic phenotyping performed by RT-DC towards viscoelastic cell properties by developing dynamic real-time deformability cytometry (dRT-DC). Dynamic tracking of cells while passing the microfluidic constriction allows to access steady-state (elasticity) and time-dependent (viscosity) material properties for a complete viscoelastic characterization of cells in suspension at high throughput. I introduced a shape mode decomposition based on a Fourier transformation, which allows to disentangle the superimposed stress responses to an extensional stress at the channel inlet and a constant shear stress in the channel. These hydrodynamic stress distributions are present in almost every microfluidic channel geometry. From the separated stress responses, viscoelastic material properties can be determined independent of cell shape.
We demonstrated experimentally the sensitivity of dRT-DC to cytoskeletal alterations and confirmed the validity of the method by reference measurements on calibrated hydrogel beads. In our work, we also presented a viscoelastic fingerprint of the major subpopulations of peripheral blood: erythrocytes, granulocytes, and peripheral blood mononuclear cells (PBMCs) (e.g., lymphocytes and monocytes), all characterized by the same method. The technique and the results have been published in Nature Communications (Fregin et al. 2019).
In cell mechanical methods based on hydrodynamic deformation, cell shape is usually monitored while a stress is applied. For extraction of material properties as well as for studying shape dynamics, it is essential to describe cell shape yielding highest strain differences for a given microfluidic system and experimental setting. Using dRT-DC, I compared nine different shape descriptors to analyze cell deformation in an extensional as well as shear flow. A relaxation time analysis was performed on different levels of data aggregation from single cells to an ensemble scale. I demonstrated that the steady-state deformation can be predicted from stress response curves without them reaching the steady-state. This is important for cell mechanical measurements in microfluidic systems as the characteristic times are unknown in general and as the channel length is fixed. In addition, by introducing a cut-off criterion for how much of the response trace needs to be captured within the channel, the analysis time per cell can be reduced while material properties can still be extracted. Performing simulations, I compared the accuracy of relaxation times extracted from ensemble and single-cell studies under experimental conditions. Introducing a scoring system to evaluate which combinations of shape descriptors and analysis strategies provide biggest effect size, we concluded that single-cell analyses in an extensional flow are most sensitive to cytoskeletal modifications independent of shape parametrization. The manuscript was submitted to the Biophysical Journal.
Finally, I translated the fast non-contact cell mechanical probing from suspension to adherent cells. No such technology has been available and with the majority of cells being adherent, a robust label-free method for mechanophenotyping at high-throughput is required. Within this thesis, I have introduced and realized a new concept: holographic vibration spectroscopy (HVS), where adherent cells are mechanically excited on a vibrating surface while their height oscillations are measured optically. Analysis is done in an interferometric heterodyne setup by using frequency multiplexing and time-averaged holography in off-axis configuration. Based on interference images captured by a high-speed complementary metal-oxide-semiconductor (CMOS) camera, I established a mathematical model to reconstruct the vibration amplitude of adherent cells as well as their retardation phase compared to the exciting vibration. From the amplitude and phase response, viscoelastic parameters can be derived, which have to be investigated in subsequent studies.
In summary, I introduced in my work two high-throughput methods for the viscoelastic characterization of suspended as well as adherent cells while highlighting applications in tissue mechanics and transfusion medicine that are relevant not only in basic but also in translational research.
In this work, spatial distributions for reactive stable and transient species that are involved
in the reaction cycle of H2O2, a key species for biomedical applications, were
determined directly in the effluent of a kINPen-sci plasma jet. The small diameter
of cold atmospheric pressure plasma jets and their operation at atmospheric pressure
that causes strong quenching reactions make diagnostics challenging. Here, various diagnostic
techniques have been employed and adapted for the use in the effluent of a
cold atmospheric pressure plasma jet, which were laser atomic absorption spectroscopy
(LAAS) at 811.5 nm for the detection of Ar(3P2), picosecond two-photon absorption
laser-induced fluorescence spectroscopy (ps-TALIF) at 225 nm and 205 nm for the
detection of O and H atoms, respectively, and continuous wave cavity ring-down spectroscopy
(cw-CRDS) at 1.506 µm for the detection of HO2, and cw-CRDS at 8000 µm
for the detection of H2O2. All these methods provide absolute number densities. In
this work, spatial distributions within the small diameter of the effluent of a CAPJ
were obtained, which have not been reported so far literature. In order to overcome the
line-of-sight limitations of CRDS, radial scans were performed and transformed into a
spatial distribution by using Abel inversion.
Based on the determined spatial density distributions for H atoms, O atoms, HO2
radicals, and H2O2 molecules, together with the investigated impact of humidity in the
feed gas on the excitation dynamics and the production of Ar(3P2), and finally on a
comparison of the experimental results to a plasma chemical and reacting flow model,
three different zones with varying reaction kinetics were identified. The densities close
to the nozzle of the kINPen-sci plasma jet were dominated by reactions within the
plasma zone including the dissociation of H2O added to the Ar feed gas and O2 that
was presumably transferred into the plasma zone by counter-propagating ionisation
waves. Notably, also the larger molecules, such as HO2 and H2O2 were mainly formed
within the plasma zone of the plasma jet. Between 1.5 mm and 5 mm below the nozzle,
the atomic species and molecular radicals generated in the plasma zone were consumed
by chemical reactions with the surrounding gas, whose composition was controlled by
applying a gas curtain. At further distances from the nozzle, where typically biological
samples are positioned, only H2O2 and HO2 were observed.
With this work, it is successfully demonstrated that even for the small diameters of
cold atmospheric pressure plasma jets the determination of spatial profiles for reactive
transient and stable species is possible within the effluent. By combining the experimental
results, important insights into the formation and consumption of H2O2 and its
precursors were gained, which are essential for the understanding of use of plasmas in
biomedical applications.
Detecting changes in plasmas is compulsory for control and the detection of novelties.
Moreover, automated novelty detection allows one to investigate large data sets to substantially
enhance the efficiency of data mining approaches. To this end we introduce permutation entropy
(PE) for the detection of changes in plasmas. PE is an information-theoretic complexity measure
based in fluctuation analysis that quantifies the degree of randomness (resp. disorder,
unpredictability) of the ordering of time series data. This method is computationally fast and
robust against noise, which allows the evaluation of large data sets in an automated procedure.
PE is applied on electron cyclotron emission and soft x-ray measurements in different
Wendelstein 7-X low-iota configuration plasmas. A spontaneous transition to high core-electron
temperature (Te) was detected, as well as a localized low-coherent intermittent oscillation which
ceased when Te increased in the transition. The results are validated with spectrogram analysis
and provide evidence that a complexity measure such as PE is a method to support in-situ
monitoring of plasma parameters and for novelty detection in plasma data. Moreover, the
acceleration in processing time offers implementations of plasma-state-detection that provides
results fast enough to induce control actions even during the experiment.
Insight into the Impact of Oxidative Stress on the Barrier Properties of Lipid Bilayer Models
(2022)
As a new field of oxidative stress-based therapy, cold physical plasma is a promising tool for several biomedical applications due to its potential to create a broad diversity of reactive oxygen and nitrogen species (RONS). Although proposed, the impact of plasma-derived RONS on the cell membrane lipids and properties is not fully understood. For this purpose, the changes in the lipid bilayer functionality under oxidative stress generated by an argon plasma jet (kINPen) were investigated by electrochemical techniques. In addition, liquid chromatography-tandem mass spectrometry was employed to analyze the plasma-induced modifications on the model lipids. Various asymmetric bilayers mimicking the structure and properties of the erythrocyte cell membrane were transferred onto a gold electrode surface by Langmuir-Blodgett/Langmuir-Schaefer deposition techniques. A strong impact of cholesterol on membrane permeabilization by plasma-derived species was revealed. Moreover, the maintenance of the barrier properties is influenced by the chemical composition of the head group. Mainly the head group size and its hydrogen bonding capacities are relevant, and phosphatidylcholines are significantly more susceptible than phosphatidylserines and other lipid classes, underlining the high relevance of this lipid class in membrane dynamics and cell physiology.
Particle-in-Cell (PIC) simulations are used to model the MS4 test thruster of Thales Deutschland. Given as input the geometric shape, material components, magnetic field and the operating parameters of the experiment, the model is able to reproduce the experimentally observed emission pattern in the plume. This is determined by the magnetic field line structure and the resulting plasma dynamics in the near-field region close to the exit.
Response of Osteoblasts to Electric Field Line Patterns Emerging from Molecule Stripe Landscapes
(2022)
Molecular surface gradients can constitute electric field landscapes and serve to control local cell adhesion and migration. Cellular responses to electric field landscapes may allow the discovery of routes to improve osseointegration of implants. Flat molecule aggregate landscapes of amine- or carboxyl-teminated dendrimers, amine-containing protein and polyelectrolytes were prepared on glass to provide lateral electric field gradients through their differing zeta potentials compared to the glass substrate. The local as well as the mesoscopic morphological responses of adhered osteoblasts (MG-63) with respect to the stripes were studied by means of Scanning Ion Conductance Microscopy (SICM) and Fluorescence Microscopy, in situ. A distinct spindle shape oriented parallel to the surface pattern as well as a preferential adhesion of the cells on the glass site have been observed at a stripe and spacing width of 20 μm. Excessive ruffling is observed at the spindle poles, where the cells extend. To explain this effect of material preference and electro-deformation, we put forward a retraction mechanism, a localized form of double-sided cathodic taxis.
Advancing Radiation-Detected Resonance Ionization towards Heavier Elements and More Exotic Nuclides
(2022)
RAdiation-Detected Resonance Ionization Spectroscopy (RADRIS) is a versatile method for highly sensitive laser spectroscopy studies of the heaviest actinides. Most of these nuclides need to be produced at accelerator facilities in fusion-evaporation reactions and are studied immediately after their production and separation from the primary beam due to their short half-lives and low production rates of only a few atoms per second or less. Only recently, the first laser spectroscopic investigation of nobelium (Z=102) was performed by applying the RADRIS technique in a buffer-gas-filled stopping cell at the GSI in Darmstadt, Germany. To expand this technique to other nobelium isotopes and for the search for atomic levels in the heaviest actinide element, lawrencium (Z=103), the sensitivity of the RADRIS setup needed to be further improved. Therefore, a new movable double-detector setup was developed, which enhances the overall efficiency by approximately 65% compared to the previously used single-detector setup. Further development work was performed to enable the study of longer-lived (t1/2>1 h) and shorter-lived nuclides (t1/2<1 s) with the RADRIS method. With a new rotatable multi-detector design, the long-lived isotope 254Fm (t1/2=3.2 h) becomes within reach for laser spectroscopy. Upcoming experiments will also tackle the short-lived isotope 251No (t1/2=0.8 s) by applying a newly implemented short RADRIS measurement cycle.